| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0009 |
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| Symbol | uspA1 |
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| ID | 6363696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 7932 |
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| End bp | 8897 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679148 |
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| Product | universal stress protein |
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| Protein accession | YP_001953953 |
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| Protein GI | 189438872 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAG CTGCAACCAA GCCCGACATC GTTGTCGGTG TGGATGGTTC CGATGAATCC
TTTGCCGCGC TGAAGTGGGC GCTTGAGGAG GCCTCGTTAA CCGGTCAGAG CGTCAACGCC
GTGTTTGGCT GGACGCATTC CTGGGATATG GGGTCCGAAC CGGACAGCGA CGAGGCCTGG
GCCAAGGTCC GCCACGATAT TGCCAACGAG CTGCGTGTGT GGGTCGACAA GGCCGCTGCA
GGCATCGACT TCGATCCGGC GAATCTGAAG CTCACCTCGG TGAAGGCCTC CGGTACTTCG
GCCCTGCTGC AGATCGGCCA TGATTCGCAG CAGATCGTGG TCGGCCGCCG CTCGCTGAGC
CGTATGGCCC GCTGGTTCAT GGGGTCCCTG TCCGCTTCGC TGGCCGAGGC CGCCGAAGTG
CCGGTGACCG TGGTGCGCAT CGCCGGCAGC GAGGATGAGA CCGTGACCGA GGCCATTGCC
AACGCCCTGA CTCCGGGAGA CAAGCCCGTT CACTACACGC AGCCTCAGCC GGTGGTTGAG
GAGGCTCGCC GCCCGGTGGT GGTTGGTGTG GATGGTTCCG AGACTTCCCG CCGTGCGTTC
GATTTCGCAC TGGAAGAAGC ACGACTGCAC GACGCGCCGC TGCATGTGAT GTTCTGCTGG
CAGCTCAAGG ATTTGGGCGT TATTCCGGGC TATGAGAACG CCGTGGCACC GGTGAAGGTC
GGTCAGCGCC GCGCCGAGGA GATTCTCTCT GAGCTGATGG CCAAGGCCCG GATTCCCGAT
GGCGTCAAGG TCAGCACAAA CGCCTTCCAT ATTCCCGCAT CCAAAGGTCT GATCGCGGCC
TCGCGGTACG CCAGCCATCT GGTGGTCGGC TCGCGTGGCC TGTCCGGGCT GGACGCGCAC
TTTCTGGGAT CGGTGTCCCG CCAGATCGTG AACTTCGCCG AATGCACGGT GACCGTGGTG
CACTGA
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| Protein sequence | MSEAATKPDI VVGVDGSDES FAALKWALEE ASLTGQSVNA VFGWTHSWDM GSEPDSDEAW
AKVRHDIANE LRVWVDKAAA GIDFDPANLK LTSVKASGTS ALLQIGHDSQ QIVVGRRSLS
RMARWFMGSL SASLAEAAEV PVTVVRIAGS EDETVTEAIA NALTPGDKPV HYTQPQPVVE
EARRPVVVGV DGSETSRRAF DFALEEARLH DAPLHVMFCW QLKDLGVIPG YENAVAPVKV
GQRRAEEILS ELMAKARIPD GVKVSTNAFH IPASKGLIAA SRYASHLVVG SRGLSGLDAH
FLGSVSRQIV NFAECTVTVV H
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