| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0007 |
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| Symbol | cspC2 |
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| ID | 6363694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 6235 |
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| End bp | 6624 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679146 |
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| Product | cold shock protein |
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| Protein accession | YP_001953951 |
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| Protein GI | 189438870 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCACCG GTCGAGTTCG TTGGTTTGAC GCAGCCAAGG GTTATGGCTT CATCACCAGT
GAGGAAGGCA AGGACGTGTT CCTGCCGGCT CAGGCCCTAC CCACTGGCGT CACCACGTTG
CGCAAGGGGG CCAAGGTGGA GTATTCCGTG GTGGACGGCC GTCGTGGGCC GCAGGCCATG
GATGTTCGCC TGATCGCCTC CGCTCCCAGC TTGGTCAAGG CCACCCGCCC GAAGGCGGAT
GACATGGCCG CCATCTGCGA GGACCTCATC AAGATGCTTG ATGCGGCCGG CAATACGTTG
CGCCGTCACC GTTACCCATC TGCTGCCGAC AGCAAAAAGC TGGCCACGTT GCTGCGTGCG
GTGGCGGATC AATTCGATGT ACAGGACTGA
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| Protein sequence | MPTGRVRWFD AAKGYGFITS EEGKDVFLPA QALPTGVTTL RKGAKVEYSV VDGRRGPQAM
DVRLIASAPS LVKATRPKAD DMAAICEDLI KMLDAAGNTL RRHRYPSAAD SKKLATLLRA
VADQFDVQD
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