Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3717 |
Symbol | |
ID | 6369520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010815 |
Strand | + |
Start bp | 67609 |
End bp | 68475 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642679130 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001953935 |
Protein GI | 189426759 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.168673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTTAC ATCAGCTAAA ACAATTTGTC GCGGCTGCAG AGTCTGAAAG CTTTACTCGT GGTGCAGAGC GAGCCTTCGT TTCGCAACCA GCCCTTTCAG CATCGATTTC CAAGCTCGAA GACGAAATGG GCACCCAACT CTTCATCCGC AACAAGCGCA GCGTCGTCCT CACCCCTGCG GGCAGAAAAC TGCTCAAGCG GGCCAAACTG ATCATTGCTG AATGTGCCCA GGCGAAGGCC GAATTGAAAC ATCACGAGGT GCAGCGATCA TTACGACTGG GCGTGATCAA CACGCTTGCC ATTGGCCAGG TGGCAAAGCT GATTGAGCAA TATCGGCGAG AAAATCCGGA GGTGTTGCTC GATGTAACTG ATGCCAGTCA GGATCAGATT GAAAAATTAC AAAAGGAAGC ACGCATCGAT TTCGCTTTGA CGCGGCTTGT CCAGGGCAAA GAAAAGAAGG GTCGTCAGGA AGTCTTGTTC AGCGAACCAT ACGTCGTCGC CCTGCCACTC GGCCACCATC TGAGCGGCCG CAAAGAGGTC AGTTTTTCTG AACTGGCAGA GGAACCGTTC ATTGCCCGCA CACATTGTGA AAGCCGGGCT CTTATTGGGG AGCTGTTGAA AGAAAAAGGG GTACGCCTCA ACGTAGTCTA CAAAACCAAC CAGGACGACA GGGCGATTTC TTTGGTCGAA GTCGGTGTCG GTATCGCCAT CATCCCGCAG CACTATGCCT CAACGTCAAT AGCCAAGATC AGCCTAGCAG ATCTGAAAGC AGAGCGGCAA ATCGGCTTTG AATGGACCGG GGAGTCGAAC AAAGAGGAAA TCGAAAAATT TGTCGATTTC TCCAAAACAG TTCCCTGGGC TCATTGA
|
Protein sequence | MELHQLKQFV AAAESESFTR GAERAFVSQP ALSASISKLE DEMGTQLFIR NKRSVVLTPA GRKLLKRAKL IIAECAQAKA ELKHHEVQRS LRLGVINTLA IGQVAKLIEQ YRRENPEVLL DVTDASQDQI EKLQKEARID FALTRLVQGK EKKGRQEVLF SEPYVVALPL GHHLSGRKEV SFSELAEEPF IARTHCESRA LIGELLKEKG VRLNVVYKTN QDDRAISLVE VGVGIAIIPQ HYASTSIAKI SLADLKAERQ IGFEWTGESN KEEIEKFVDF SKTVPWAH
|
| |