Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3681 |
Symbol | |
ID | 6369586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010815 |
Strand | - |
Start bp | 38254 |
End bp | 39366 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642679095 |
Product | plasmid encoded RepA protein |
Protein accession | YP_001953900 |
Protein GI | 189426724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.936981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACG ACGACCACCT GGTGTTGCCT GGTTTTGGCG GGACTATCAG CGAAGAAGAG CTGATGGCAA AGCAGGCACT CCTTAAACAA AAACAGGCCG AAGAAAAGGC TCGCAAGCAG ATTGCCGAGA ATATCAGCAT CGGTCAGCTG AATCTTGGCC TTTTACCGAT TACCAACACA TCACTCCCAA CCCCCCGGCA AGAAAATCAC CACCACGAAA CTTCAGAGAC ACAGCAAGTA ATCTCACGTA AAAAGAAAAA AATGGCAGAA GAGATAGTCA GCATAATGGA GCATGACGCC TCTGAGCTGG GCATGATTTC ATACATGGCC CAGATGTTGG TTCAAATGAC ACTGCCACAC TCTGAATTAC GCGGGACAAA CGGCCTGCCG GTTACCGAAT ACTCAAAAAC AAACGGCAGA GCCACCCTGA CCATCATGAC ACCCTCAATT TATGGTGGCA TCCCTTTTGG CGTAGTTCCT CGCCAACTAC TGATGTGGTT AACAACAGAA GCGGTACGCA CTAAACAAAA AGAGATTTTT TTAGGGGATT CTCTCACTGC ATTTATGAAA GATATAGGCA TTGCCGTAAC TGGGGGGAAA GAGGGAAGCT TAACGCGCTT TAAAAAACAG TCAGACCGAC TGTTCAACTC ATTCATCAAC TACGATCCAG GCGACGCAAC AAATGCACCA CGCTCTAACC TAAAAATAAC ATCCAGCAAC AAATCATTCT CTTTTTGGAA AACCGACGGG AAGCCGACCT GGGAGTCACA CATCGTACTC GATACTGAGT TTTATGAGTC CCTCATACAA AACCCGGTAC CAATAGACAA AAGAGCCATT CGCGCGCTTT CAGGCAACGC CTTTGCACTA GACCTTTATT GTTGGCTTAC CTGGCGCATG TATTCGGTAC GAAAATACAC CAAAATCCCT TGGGAATATC TGCAACTACA ATTTGGGGCA AACTACAAAG ACCTGCGCTT CTTTAGAAGA CGCTTTGCAG AGGTACTTAA TCAGGTCCTT GCAGTATACC CGGCATCCGT ATCAGTAGAA AAGGACTGCC TAATATTGCA GCCCTCCTCA ACCTCAATAC GAAAGATTAC TCCCAGGACT TAG
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Protein sequence | MTNDDHLVLP GFGGTISEEE LMAKQALLKQ KQAEEKARKQ IAENISIGQL NLGLLPITNT SLPTPRQENH HHETSETQQV ISRKKKKMAE EIVSIMEHDA SELGMISYMA QMLVQMTLPH SELRGTNGLP VTEYSKTNGR ATLTIMTPSI YGGIPFGVVP RQLLMWLTTE AVRTKQKEIF LGDSLTAFMK DIGIAVTGGK EGSLTRFKKQ SDRLFNSFIN YDPGDATNAP RSNLKITSSN KSFSFWKTDG KPTWESHIVL DTEFYESLIQ NPVPIDKRAI RALSGNAFAL DLYCWLTWRM YSVRKYTKIP WEYLQLQFGA NYKDLRFFRR RFAEVLNQVL AVYPASVSVE KDCLILQPSS TSIRKITPRT
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