| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3642 |
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| Symbol | |
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| ID | 6368164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3915289 |
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| End bp | 3916881 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642679057 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001953862 |
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| Protein GI | 189426685 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0951488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA GGACGATACT CGCAGTAGTA CTTTCCATCG GTGTTTTCTA TCTTTTTTCG
TTTTTTTATG GTCCAGAAAA GAAACCAGCT CCTGCTGCTG TCTCTGTCCC TGTTAAAACT
GAGAATGTTG GAGCTGCACC CGCAGTGAGT GTTCAGGCTG CGGCCATTGC CCCGGTGGTG
GTTCCCAAGA TAGTTTCTGC GGCCGATGTG ACGGTAGAAA CCGAGCGTTA TACCGCTGTC
TTTAGCGGTG TAGGTGCTTC TCTGAAGAGT CTGACGTTAA AAGGTTTTCG AGAGACCAAC
AAACCTGGTG CAGCGCAGGT AAAACTGCTT GCCAATGCTG ATCCTGCCCT GCCGTCCTTT
TCAACCCGTG GAGTTGGTTT TGCTCTTTCA GCTCAAGCAG CCTACAGTCC TAATGTAAGC
TCCTTAAAGC TCCTGTCCGG TGAAAAGAAG CAGCTTGTCT TTACCTATGT CGACGCTCAG
GGCTTCGTTG TCCGTAAGAC GTATACTTTT GACGGTACCG GTTACGGGAT CGCTTTGGAG
ACGCAGCTGG TCAACAACTC GGCTGCACCT ATTGCAGGTG CATTTCAGTA TCTGTTTACT
TCTCCGTTCG ATCCACCTCA AAAAGACGGT CGTTATGAAA CCTATGGTTC CTCTCTTTAT
GCAGATGGCT CACTACATAC CGATGCGCCT AAGAACGTTG CTTCCGCAAC CAAGAAGTAT
GACAAGGGCA TAACGTGGGC AGCCATCAAT GATAAATACT TTTTAAGTGC CTTGCTCTCC
GTAAATAACA GTATAGCGTC AGTTGAGTTG AAGAAGAGTG CCGCCGGTTA CCTTGAGTCT
GATATCAGTA CTCCGGCTTT TTCTGTTGCT CCTGGCCAGG CTGTGACCGT TGCACATAAA
CTGTTTATCG GCCCCAAAGA GATCGACATC CTCAAGGCTC AAGGCAGCTC TCTGGAGCAG
TCACTTGATC TGGGCTGGTT CTCTGCCATT GCCAAACCGA TGCTCTATTC GCTTAAATTC
TTCTATCGCT ATGTAGGCAA CTACGGTATT GCGATCATTA TTATCACCGT CATCCTGAAG
ATATTTTTCT TTCCACTTAC CCATAAGAGC TACAAGTCGA TGAAAGAAAT GGGTAAATTG
CAGCCTAAGA TGGCTGCTTT GAAAGAGAAA TACAAAAATG ACAAAGATGC CATGAACCGC
GCTGTCATGG AGTTGTACCG CGACCACAAG GTTAACCCTC TGGGTGGCTG CCTCCCCATG
ATTGTTCAGA TCCCGGTGTT TTTTGCCCTT TACAAGGCGC TGATGTATTC GATTGAACTG
CGGCATGCCC CGTTCATGTT CTGGATTACC GACCTGTCTG ACAAGGACCC CTTTTATGTG
ACTCCGGTCA TTATGGGTGT CACCATGTTT ATTCAGCAGA AAATGACTCC TTCCAACATG
GATGAAATGC AGCAGAAAAT CATGCTGGGT CTGCCGGTTA TCTTTACTTT CATGTTTCTC
AGTTTCCCCT CCGGCCTGGT TCTGTACTGG TTGATTAACA ATATTCTGAC CATTGGTCAG
CAGGCATATA TCAACAAGCT TGTTAAAGAC TGA
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| Protein sequence | MEKRTILAVV LSIGVFYLFS FFYGPEKKPA PAAVSVPVKT ENVGAAPAVS VQAAAIAPVV
VPKIVSAADV TVETERYTAV FSGVGASLKS LTLKGFRETN KPGAAQVKLL ANADPALPSF
STRGVGFALS AQAAYSPNVS SLKLLSGEKK QLVFTYVDAQ GFVVRKTYTF DGTGYGIALE
TQLVNNSAAP IAGAFQYLFT SPFDPPQKDG RYETYGSSLY ADGSLHTDAP KNVASATKKY
DKGITWAAIN DKYFLSALLS VNNSIASVEL KKSAAGYLES DISTPAFSVA PGQAVTVAHK
LFIGPKEIDI LKAQGSSLEQ SLDLGWFSAI AKPMLYSLKF FYRYVGNYGI AIIIITVILK
IFFFPLTHKS YKSMKEMGKL QPKMAALKEK YKNDKDAMNR AVMELYRDHK VNPLGGCLPM
IVQIPVFFAL YKALMYSIEL RHAPFMFWIT DLSDKDPFYV TPVIMGVTMF IQQKMTPSNM
DEMQQKIMLG LPVIFTFMFL SFPSGLVLYW LINNILTIGQ QAYINKLVKD
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