Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3621 |
Symbol | |
ID | 6367900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3890631 |
End bp | 3893147 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642679037 |
Product | helicase c2 |
Protein accession | YP_001953842 |
Protein GI | 189426665 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGCAA CCTTTTCAAC TGATTGCAGC GCCCTGATCC GTTTTGAGAT CAAACAGGCC CGTGGTAATG AGGTCTTCTT CATCGCCTGC CTGGACGACA ATGGTGTGAT GGTCTCTGCC GAGGCCATTG CCCGTGGCAA TAAGCACGCC GTACCGGCCA TCCTCTCCCG CGCCTCGGCC GGCCAGATGG TGCTGCACAA CCACCCCTCC GGCGAGCTGA TCCCCTCTGA TGCTGATCTT GATCTGGCCT CGATCTGCGG CAACAACGGG ATCGGTTTCG GCATCATCGA CAATGACTGC CAGCGTTGCT ATCTGGTGGT GGCGCCCCAT ACCCCCCGCA CCGGCGAACG GCTTAATTTT GATGAGCTGG AAAAGGTCTT TGGCTCTGAC GGGATGCTGG CTAAGCATCT TAAGGGGTAT GAAAAACGGG ATGAACAGGT GCGGATGGCC TTTAGCGTGG CAACCGCCTT TAACGACAAC ACCGTGGCGC TGATTGAGGC CGGTACCGGC ACCGGCAAAT CACTGGCCTA TCTGGTGCCT GCCCTGCTCT GGGCCATGCG TAATGATCAA CGGGTGGTGA TCTCCACTAA CACCATCAAC CTGCAGGAAC AGCTGATCAA GAAGGATATT CCCCTGCTGC AACGCCATGC TGCCACGGAG TTCACCGCCT GTCTGGTCAA GGGGCGCGGC AACTACCTTT GCCTGCGCAA ACTGGGCGGG GTGCTGGATG AGCCGTCCCT GTTCCCGGAC AGCGCTTCGG AGGAGTTACA GGCCATAGCT GCCTGGAGCG AAACCACTCG CAGCGGCTGC CTGAGCGATC TCTCCTTCCA TCCTGCCTGG GAGGTCTGGG ATGACCTGCG TTGCGAGGCA GACCAGTGTG GCCGTTCCCG CTGTCCGGAG TTTAACCGCT GCTTTTTCTA CAAGGCGCGC CGCGATGCCG CTTCAGCCCG GCTGCTGGTG GTCAACCACG CCCTGCTGCT GGCTGATATC GCCCTGCGCC GTGAGAGCGG TTATGATGCG GTTGCCATTC TGCCACCCTT CAGCCGTCTG ATTATTGATG AGGCCCACCA CCTGGAAGAG GCGGCCACCG GCGCCTTGTC AGTCAGGATC AGCCGGGCCG GGTTGATGAA GCAACTGTCA AGGCTGGCGC CATCCGGTGG CAGAGCCGGC ATCCTGAGCG TACTGAACAC CAAGATCGGC AAGGAACTAC CGGAAGAGCT GGATGCCCTG TATCAGGAAC TATCCGGCCT GATCGAGGCT GCCCTACTGC CCCAGGTCCA TGAGCTGGCA GGCGCGGTTG ACCGTGAGCT GGACTGGCTT GCCCAGGCCT TGCAAGGTGA AATGCAACAA GGAGATGATC AGCGGGGTGG TGAGCTGAAG CGCAGGATTA CCGCAGAGGT GCGTGCCACA CCGTTCTGGC ATGAGCTGGA GACCCGCCTG AAGCGTCTGG GCGAGCAGTT GCAGGAACTG GCCGATGGTC TGGGAGCACT GGACCGGGCT GCTGCCAAGC TGCCGGACAC GGTCATGCAG GCGGTGAACG GGCTGTTAAC TGACGCCTTT GGCATTGGTC AGCGTCTGGT GGCGATCAGC CGTGAACTGG CCTGGTTCTG CACTGATGAT CCTGAGGCCT GCTGCTGGCT GGAGGCCAAG CAGACCAGCC GGGGCAGCCA GGCCACGGTC TGTGTGGCAC CCCTGGATGT GGCAGAGACC ATCAAGACCG CTTTGCTTGA TCCGATCCCC ACGGTGGTGC TGACCTCAGC CACCCTGACC GTGGGTGGCT CATTCGGCTA TCTGCGCAGA AGGACCGGCC TTGACCTGCT GGAGTCGGAG CGGCTGCAGG AGCTGGCACT GGCCTCACCC TTTGATTATG CAGAGCAGTC ATTGGTGGCC ATCCCCCGGG ATCTACCTGA CCCAACCAGT TTTGCCTTTC GCCAGCCATT GGCTGATGCA GTGCTGCGGG CGATCAGCAT CTCGCAGGGA GGCGCCTTTG TGCTGTTCAC CTCTTTTGAC CTGCTGCGTC AGACTCATGC TGCCCTTAAA GCTGAACTGG AAAATCAGGG AATAACGGTA TTGCGGCAGG GTGAGGGGGG CGGCAGGCAC CAGCTGTTGG CCCGTTTCCG CAAGGAACAG CATGCCGTGC TGTTCGGTAC TGATTCTTTC TGGGAAGGGG TGGATGTCAA GGGGGATGCC CTGCGCTTGG TGGTGATTGC CCGGCTGCCG TTTCAGGTGC CGACAGAGCC GATCCAGCAG GCAAGGGCAG AGCGGATCAC CAGCCTGGGG GGCGATCCGT TCCGTGAGAT GTCAGTGCCC CAGGCGGTGC TCAAGCTGCG TCAGGGCTTT GGCCGCCTGA TCCGCAGCCG GACTGACCGT GGGGCCGTGC TGATTCTTGA TAGCCGGATG GTCACCAAGA ATTATGGTGC GCGTTTCAGA AAGTCTTTGC CTGAGGCCGC ACAACTGATC GCTCCGCTGG ATCAGGTATT CAGCCGGATG GAGCAGTTTT TCCAATCATG GCACTGA
|
Protein sequence | MPATFSTDCS ALIRFEIKQA RGNEVFFIAC LDDNGVMVSA EAIARGNKHA VPAILSRASA GQMVLHNHPS GELIPSDADL DLASICGNNG IGFGIIDNDC QRCYLVVAPH TPRTGERLNF DELEKVFGSD GMLAKHLKGY EKRDEQVRMA FSVATAFNDN TVALIEAGTG TGKSLAYLVP ALLWAMRNDQ RVVISTNTIN LQEQLIKKDI PLLQRHAATE FTACLVKGRG NYLCLRKLGG VLDEPSLFPD SASEELQAIA AWSETTRSGC LSDLSFHPAW EVWDDLRCEA DQCGRSRCPE FNRCFFYKAR RDAASARLLV VNHALLLADI ALRRESGYDA VAILPPFSRL IIDEAHHLEE AATGALSVRI SRAGLMKQLS RLAPSGGRAG ILSVLNTKIG KELPEELDAL YQELSGLIEA ALLPQVHELA GAVDRELDWL AQALQGEMQQ GDDQRGGELK RRITAEVRAT PFWHELETRL KRLGEQLQEL ADGLGALDRA AAKLPDTVMQ AVNGLLTDAF GIGQRLVAIS RELAWFCTDD PEACCWLEAK QTSRGSQATV CVAPLDVAET IKTALLDPIP TVVLTSATLT VGGSFGYLRR RTGLDLLESE RLQELALASP FDYAEQSLVA IPRDLPDPTS FAFRQPLADA VLRAISISQG GAFVLFTSFD LLRQTHAALK AELENQGITV LRQGEGGGRH QLLARFRKEQ HAVLFGTDSF WEGVDVKGDA LRLVVIARLP FQVPTEPIQQ ARAERITSLG GDPFREMSVP QAVLKLRQGF GRLIRSRTDR GAVLILDSRM VTKNYGARFR KSLPEAAQLI APLDQVFSRM EQFFQSWH
|
| |