Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3565 |
Symbol | |
ID | 6366429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3835845 |
End bp | 3837203 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642678980 |
Product | MATE efflux family protein |
Protein accession | YP_001953786 |
Protein GI | 189426609 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCC TGCTGCATCG CATATTCCCC TGTCTGGACA GCAACAAACC TGCCTCAATC CGCTGCAACG TCTTCCGGCT GTCGCTGCCG GTGCTGCTCT CATCCCTGTT TCAACGGCTG GTTGCCATTG TTGATATCTT TCTGACCGGC GGTCTGGGGG CCTCGGCCAT TGCCGCCACC GGGCTCGGTC AACTGCAGAT ATTTGTGATC ATGACCATTT TCTGGGGGCT TTCCACCGGT ACCACGGTGG TGATCGCCCA TCTGACCGGG GCGGGCCGAC ATGAAGAGGC AAAGCGGGCT GCCGGTACAG CGGTACTGTT CTGTCTGGGG CTGACCGCGA TCGTCTCGCT GATCGGGGCC TATGGCGGTG GTGAGCTGGC CCGTCTGATG GGGGCCACGC CGGAGGTGCA AAAGCTGGCC CATGAGTATA TCCGGCTGGT CTTTCTCTGG CTGATCTGGA CCACCGGGGT CAACATCCTT TCGGCTATCA TGCATGGCGT GGGCAACACC CGCACCCCGA TGGAGGGGAT TCTGCTGGTC AACATCCTGC ATATCCTGCT GGCCTGGCCG CTGATCTACG GTAAGTTCGG CCTGCCTGCC ATGGGGGTCA AAGGGGCGGC AATCGCCATT AACTGCTCGG AATTCATCGG TTGTTCGTAC CTGCTCTGGC AGGCCTTCCG GCGGGGCTAC CTGACTATCG GGCTGCCTGA TCGGGAGCTG TTTAGCAGGA TCTGGCAGGT AGGTTGGCCG GTTGCCCTGG AACGGGTGGC CCAGCAATCC GGGCAGCTGG TCTACTCCAG CGTGGTGATC GCCTACGGCA CCACCGCCTA CGCTGCCCAC CAGATCGGAC TTTCCATTGA ATCGCTTTCC TTCATGCCCG GTGCCGGTAT GGGGATCGCT GCCGCCACCC TGATGGGGCA GTCGCTGGGA GCCAGAAAGT ACCAGCGCGC CCATGTCAGC CATGTGGAGG CGCTACGGCT GGCCCTGGTG GTAATGGGGA TCATGGCGCT GATCTTTCTG TTGATCCCGC AGTATCTGGT GATGATTTTC ACCCATGACC CGGAGGTGAT CCGACAGGGA GCGGTCTTTC TGCGGATCGT GGCCTTTGCC CAGATCCCGC TGGCGGTCTC CTTTGTCTAT GCCGGTTCTC TGCGGGGGGC GGGCGATACC TTCTACGTCT TTATCGTGAC GCTGCTGACC ATGTGGGGGG TGCGGGTGCT GCTGGCCTGG ATCGCCGGAC CGGTGCTGCA CCTGTCACTG TATGCGGTAT GGGGGGTGTT TCTGGTGGAT TGGTACGTGC GGGCCGTGGC CTTTGCCTGG CGCTATCACA AGCGGGATCT GCACGGGATA ACGCTATAA
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Protein sequence | MSALLHRIFP CLDSNKPASI RCNVFRLSLP VLLSSLFQRL VAIVDIFLTG GLGASAIAAT GLGQLQIFVI MTIFWGLSTG TTVVIAHLTG AGRHEEAKRA AGTAVLFCLG LTAIVSLIGA YGGGELARLM GATPEVQKLA HEYIRLVFLW LIWTTGVNIL SAIMHGVGNT RTPMEGILLV NILHILLAWP LIYGKFGLPA MGVKGAAIAI NCSEFIGCSY LLWQAFRRGY LTIGLPDREL FSRIWQVGWP VALERVAQQS GQLVYSSVVI AYGTTAYAAH QIGLSIESLS FMPGAGMGIA AATLMGQSLG ARKYQRAHVS HVEALRLALV VMGIMALIFL LIPQYLVMIF THDPEVIRQG AVFLRIVAFA QIPLAVSFVY AGSLRGAGDT FYVFIVTLLT MWGVRVLLAW IAGPVLHLSL YAVWGVFLVD WYVRAVAFAW RYHKRDLHGI TL
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