| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3554 |
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| Symbol | |
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| ID | 6367566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3824229 |
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| End bp | 3826820 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642678969 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_001953775 |
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| Protein GI | 189426598 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
[COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.235354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGCC AGACCCGGCA GCCGGTACGA CATAGCCACG GCGGCAATCT GCGTGCCTTG
AGTCAGGCAG CAGGCCTGCC GCAGGGAGAA CTGCTGGACT TCTCCGCCAA CATCAACCCG
CTGGGGCCGC CGGACTGGCT GCGCCCGCTG ATTGAAAGCC GGATCAGCGA TCTGATCCAT
TACCCTGACC CGGACGCAAC TGAACTGGTT GAGGCCTTGG CCGCCCTGCA CCGGATTCCG
GCTGACCAGA TCCTGGTGGG TAACGGAGCC ACAGAACTGC TGCACCTGCT GCCCCGTGCG
CTGGGTTGCT CCTCACTGCT GTTAGCGGTG CCCAGCTATG CCGATTATGA GGAACCGGCC
CGGCTGTCCG GTCTGAACAT CGAGCAGTTT TTTCTCTCTC CTGATACCGG TTTTCTGCTT
GATCCAACCT GCCTTGTACC GTTCCTGAAA CCAGCCCAGC TGGTGCTGCT GGGCCAGCCC
AACAACCCCA CCGGACGCAC CTTTGATGCT GCCAGCCTGC GCCGGATAGC AGCGGAGCAT
CCAGCCACCC TGTTTGTGGT GGATGAGTCA TTCATCGGCT TTACCGATGC CAGTCAGAGC
CTGCAGCAGA ACCGGCCTGA AAATATCCTG ATCCTGACAT CTTTAACCAA GCTGTATGCC
ATTCCCGGCC TGCGTCTGGG CTACCTGACC GGCGCTGCAG CGCATATCCG GCAGCTTAAA
AACTATCTGC CCAACTGGAC CGTCAACAGC CTGGCCCAGG CCGTGGGGGT GCGGGCAGTA
CAGGATACAG AGTACCTGCA GCACAGCCGC AGCTTTGTGA CAGGGCAGCG GGAAGCTCTT
GCGGCGCTGC TGTCCAGCCT GTCGGGCCTG ACAGTCTACC CCGCTGAGGC CAACTTCCTG
CTGCTGCGGC TTGATCATCC CACCCTTGCT GCACAGCAGC TTGCTGATCT GGCCCTGCAA
CAGGGGATCG CCCTGCGGGT CTGCGGGAAT TTTAGCGGGC TGGATGGCCG CTACTTCCGT
CTGGCGGTGC GGACTGAACC GGAGCAGCAG CGGCTCTACA CTGTTTTGCA GAGTATCCTG
GCACCATCAC GGCCACGAAT TGTGAAGCGT CAAACCCCGG CGATCATGTT TCAGGGCACC
GGCTCCAACG CCGGCAAGAG TATCCTGACC GCTGCGCTCT GCAGGATCTT GAAGCAGGAT
GGCTATGATG TGGCGCCGTT CAAGGCCCAG AACATGTCGC TCAACTCCTT TGTGACCCGT
GACGGCGGTG AGATGGGACG GGCCCAGGTG CTGCAGGCCC AGGCCTGTCG CCTTGACCCG
GACGTACGGA TGAATCCGGT GCTGCTGAAA CCCAATAGTG AGACCGGTTC CCAGGTGATC
CTCTGCGGCA AGGCGATTGG CACCACCCAC TTTAAGGACT ATGCAGAGCA ACGGGCTGAG
ATCTTTAAAA CAGTACGACG TTGCTACGAT GAACTGTCTG CTGAACATCA GATCATGGTG
CTGGAAGGGG CGGGCAGTCC GGCAGAGGTG AACCTGAAGG CCAATGATAT TGTGAATATG
AACATGGCCC GCTATGCCCA TGCGCCGGTG CTGCTGGTGG GTGATATCGA CCGGGGCGGC
GTGTTTGCCT CCTTTGTGGG GACCATGGAG GTTCTAAGCG AGGCGGAACG GGCCATGGTG
GCCGGGTTTG TGATCAACCG CTTCCGGGGC GATGCAAGCC TGCTGGGTGA TGCCTTGGCC
TACACCCGCT TTCACACCAA TAAGCCGGTG CTGGGTACCA TTCCCTATCT GCATAACCTG
GGCTTGCCGG AGGAGGATTC GGTCTCCTTC AAGCAGGGGT TGCTGGCTGC CGGGGCAAAG
GATAGCCAAC TGCTTGATAT TGCAGTGCTG GACCTGCCGC ACATCTCCAA CTTTACCGAC
CTTGATCCGT TAGGGCTGGA GCCGGATGTG GGCCTGCGGA TCGTCCGGTC AGTAGCGAAA
CTTGGCCAGC CTGATGCCCT GATCCTGGCC GGCAGCAAGA ATACCCTGGC TGACCTGGCC
TGGCTGCAAC AGACCGGACT GGCAGCAGCC GTCCTTGAGC TGGCCCAGGC TGGCCAGACT
GAGATCATCG GCATCTGCGG TGGTTTTCAG TTGCTGGGCC AGCAGATCAG CGATCCCCAT
GCCATTGAAT CCGGGGCTGG GCAACAACAA GGATTGGGGC TGCTGGCGAT CAATACGGTC
ATGGCAGAAG AAAAGACCAC CCTGCAGACC CGCTGTTGTC ATCTCACCTC CGGCTGCCTG
CTGAGCGGCT ACGAGATCCA CCACGGCATC ACCACTGCAG AAGGGATTGA ACCACTGATC
ACCGGACAGG ATGGCAGGCT GCTCGGTGCA GGCAGTGCCA ACGGTCTGAT CTGGGGCAGC
TACCTGCATG GGATCTTTGA TGCAGACCCA TTCCGGCGCT GGTTGCTTGA CCGGCTGCGG
CAACGTAAGG GTTGGCAGAG CGATGGCCAG ATCCGGACCT GCTATGATCT GGAACCGGCC
CTGGACCGCT TGGCGGATAC GGTGCGTAAC AGTCTGGATC TGCGGGAAAT CTATCGGTTG
CTGCGGCTAT GA
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| Protein sequence | MTGQTRQPVR HSHGGNLRAL SQAAGLPQGE LLDFSANINP LGPPDWLRPL IESRISDLIH
YPDPDATELV EALAALHRIP ADQILVGNGA TELLHLLPRA LGCSSLLLAV PSYADYEEPA
RLSGLNIEQF FLSPDTGFLL DPTCLVPFLK PAQLVLLGQP NNPTGRTFDA ASLRRIAAEH
PATLFVVDES FIGFTDASQS LQQNRPENIL ILTSLTKLYA IPGLRLGYLT GAAAHIRQLK
NYLPNWTVNS LAQAVGVRAV QDTEYLQHSR SFVTGQREAL AALLSSLSGL TVYPAEANFL
LLRLDHPTLA AQQLADLALQ QGIALRVCGN FSGLDGRYFR LAVRTEPEQQ RLYTVLQSIL
APSRPRIVKR QTPAIMFQGT GSNAGKSILT AALCRILKQD GYDVAPFKAQ NMSLNSFVTR
DGGEMGRAQV LQAQACRLDP DVRMNPVLLK PNSETGSQVI LCGKAIGTTH FKDYAEQRAE
IFKTVRRCYD ELSAEHQIMV LEGAGSPAEV NLKANDIVNM NMARYAHAPV LLVGDIDRGG
VFASFVGTME VLSEAERAMV AGFVINRFRG DASLLGDALA YTRFHTNKPV LGTIPYLHNL
GLPEEDSVSF KQGLLAAGAK DSQLLDIAVL DLPHISNFTD LDPLGLEPDV GLRIVRSVAK
LGQPDALILA GSKNTLADLA WLQQTGLAAA VLELAQAGQT EIIGICGGFQ LLGQQISDPH
AIESGAGQQQ GLGLLAINTV MAEEKTTLQT RCCHLTSGCL LSGYEIHHGI TTAEGIEPLI
TGQDGRLLGA GSANGLIWGS YLHGIFDADP FRRWLLDRLR QRKGWQSDGQ IRTCYDLEPA
LDRLADTVRN SLDLREIYRL LRL
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