Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3540 |
Symbol | |
ID | 6369490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3808046 |
End bp | 3809374 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642678955 |
Product | anaerobic C4-dicarboxylate transporter |
Protein accession | YP_001953761 |
Protein GI | 189426584 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000247021 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATGT TCTGGATCCA ATTCGTGCTG GTACTTGGGG CAGTTTTGAT CGGTATCCGC CGGGGCGGTG TCTCCCTCGG CCTGATCGGT GGTCTGGGGG TCTCACTGCT GGTGCTGGGC TTCCGCAGTG CGCCGTCCGA GCCGCCCATT GCGGTGATGC TGATCATCCT GGCGGTGGTG ACCGCCTCGG CCACCCTGCA GGTGGCAGGC GGGCTTGACT ACCTGGTGCA GCTGACCGAG CGGATGCTGC GCGCCCATCC CAAGTACGTC ACCATCCTTG CCCCGCTCTC AACCTTTTTA CTGACCGTCT GCTGCGGTAC CGGCCATGCC GTCTATGCCC TGCTGCCGGT TATCTCCGAC GTGGCGCTCA AGACCGGTAT CCGTCCGGAA CGTCCCATGG CCATCTCCAG TGTGGCCTCA CAGATGGGTA TTACCGCCAG TCCGGTTGCA GCCGCCGTGA CCTTCTTTCT CGGCTTTGCC GCCAAGGCCG GCTATCCGGT CACCCTGGTG GATATCATCA TGGTCACCAT GCCGGCCGGT GTGCTGGGTG TGCTGGCAGC TGCCGCCTGG AGCTTCAACC GCGGTAAAGA CCTGGATAAA GACCAGGAAT TTCAGGCCCG CCTGGAAGAT CCCGACTTCC GTAACACCCT GAACGCCAAC GTCACGACGC TGGACCAGAA GATCTCCACC ACGGCCAAAC TGTCAGTGCT GCTGTTCTTT GCCGGGGTCG GTTCCATCAT CCTCCTGGCC AGTTTCCCGG AACTGCTCCC CCTTGACCAC AAAGGCAAGG CAGTGGCCAT GACCACGGTG GTGCAGTTTG TCATGCTGGC CTTTGGCGCC TTCATCATGT TCGCCGGTAA CGTCAAGGCC AAGGATATCG CCCACTCCAG CGTCTTCACC GCCGGTATGA TCGCCGTGGT CTCCATCTTC GGTATCGCCT GGATGAGCGA CACCTTTATC TCCGCCAACA AGGGTTATCT GATCGAGACC ATCGGTACCA TGGTCAAGAC AGCCCCCTGG ACCTTTGCCA TCGCCACCTT CTGTATCTCG GCCTTTGTCA AGAGTCAGGC CGCCACCCTG GCCATTACCC TGCCGCTGGG TCTGGCCCTG GGCCTGCCGG TGCCCCTGCT GCTGGGCCTG ATGCCGGCCA GCTACGCCTA CTTCTTCTTT GCCTTCTACC CCAGCGACCT GGCTGCCATC AATATGGATC GTACCGGCAC CACCAGAATC GGCAAGTACC TGTTAAACCA CAGCTTCATG ATCCCCGGCC TGATCGGTGT CAGCACCTCA ACCGTCATAG CCTACATCAT CTCACGCTTC ATGTTCTAG
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Protein sequence | MLMFWIQFVL VLGAVLIGIR RGGVSLGLIG GLGVSLLVLG FRSAPSEPPI AVMLIILAVV TASATLQVAG GLDYLVQLTE RMLRAHPKYV TILAPLSTFL LTVCCGTGHA VYALLPVISD VALKTGIRPE RPMAISSVAS QMGITASPVA AAVTFFLGFA AKAGYPVTLV DIIMVTMPAG VLGVLAAAAW SFNRGKDLDK DQEFQARLED PDFRNTLNAN VTTLDQKIST TAKLSVLLFF AGVGSIILLA SFPELLPLDH KGKAVAMTTV VQFVMLAFGA FIMFAGNVKA KDIAHSSVFT AGMIAVVSIF GIAWMSDTFI SANKGYLIET IGTMVKTAPW TFAIATFCIS AFVKSQAATL AITLPLGLAL GLPVPLLLGL MPASYAYFFF AFYPSDLAAI NMDRTGTTRI GKYLLNHSFM IPGLIGVSTS TVIAYIISRF MF
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