| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3526 |
|---|
| Symbol | |
|---|
| ID | 6368759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3793421 |
|---|
| End bp | 3795175 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642678943 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001953749 |
|---|
| Protein GI | 189426572 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGTC CAGCCACCCT TTGCATAGCC CTGTTTTTCT GCCTGTTGCT ACCATTCAGC
GCCTTAGCCA GGCCGATCAT CGTCGGCGGT GACCGGGACT ATCCCCCCTA CGAATTTCTC
GATCCAAACG GAAAACCGGC CGGTTACAAT GTGGAGCTGA CCAGGGCGAT AGCCGAGGTG
ATGGGACTGC AGGTGGAGTT CCGGCTGGGG GGCTGGTCCG AGCAGCTGCG GGATCTGAAG
GAGGGCCGGA TCGATCTGCT GCAGGGGATC TCCTGGTCGG AGCAGCGGGC CGCCCAGATT
GACTTCATCC CGCCCCACAC CGTTGTCAAC CACGCCATCT TTGCCCGCAG GGAATCGCCG
GTGGTCAGTT CTCTGGCCGA GTTGAAGGGC AAAAAGGTCA CCCTGCACCG TGACGGGATC
ATGCATGAAC AGCTAAGCCG TCTGGGCTAC GGCCCGGATC TGGTGCCCAC CTCCACCCCG
GCCGATGCCC TGCGGCTGCT GGCCGCAGGC GGCTGCGACT ATGCGGTGGT CGCCATCGTG
CCGGGCATGT ACATCATCCG CGAATACAAG CTGACCAACC TGGTGCCGGT GGCCCGCAGC
ATTGCCGCAC AGAAATACGG CCATGCCGTG CGCAAGGGCA ACGGCGAACT GCAGGCCAAA
CTGACCGAAG GGCTGGCAAT CCTGAAAAAG ACCGGCCAGT ACGACGAAAT CCACACCAGA
TGGCTGGGGG TGCTGGAGCC GGAGGGCCTG GCCATTGCCA AGGCGATCAG GCTGGCAGCC
CTGGTCGTGG TGCCGCTCTT GCTGGTACTG GGGGGGATGG CGTTCTGGTC CCGCTCACTG
CATCAACAGG TGGCCTTGCG GACCGCCGAC CTGACCCGTG AGATTGCCGA GCGGACCACT
GCCGAGCAGG AGCTGCGCCG TAATCAGCAG CAGCTGGTGC AGGCCGACAA GATGGCAGCC
CTGGGGGTGC TGGTCTCCGG GGTCGCCCAT GAGATCAACA ACCCGAACGG CCTGATCCTG
CTGAACATGC CGATCCTGAA AGATGTCTGC GCTGATGCCC TGGAGCTGCT GGAACAGCAC
TGCCCGGATC AGGATCAGAT CCGGCTGGGT GGGCTGCCGT ACCGGCGCAT CCGGCAGGAA
CTGCCCCAAA TGCTGGATGA GATGCAGGAC GGTGCGCGGC GGATCAAGCG GATTGTGGAA
GACCTGAAGG ACTTTGCCCG CCAGGATGAT GCCGCCCTGA TGGAGCCGCT GAACCTGAAC
CATGTCGTTC AGGCTGCGGT ACGGCTGGTG GAGCGTTCAT TACGCACGGC AACCAACCGC
TTTGAGGCTG AATATGCCGA GCCGTTGCCG CTGGTACAGG GTAACAGCCA ACGGATTGAG
CAGATACTGG TCAACCTGCT GCTAAACGCC TGCCAGGCAC TCACCGACCA GAATCGTGGC
ATTTTTCTAC GCACCTTTAT CGATCATGCA ACCAATAGTG TCGGCGTTTC AGTCCGGGAC
GAGGGCTGCG GCATCGCCCC GGAGCATCTG GACCGCCTGA CCGACCCGTT CTTTACCACC
AAGCGGGAGA GCGGCGGCAC CGGCCTGGGG CTGTCGGTCT CAGCCGGAAT CGTCAAGGAG
CATGGCGGCA GCCTGCAGTT TTCCTCACCA CCCGGCCAGG GCACCACCGT TACCCTGCTG
CTGCCGATCC ATACGGAGGC ACCCCATCAT GTCTGGAACC CTGTTTCCCG CCTTTGGTAT
CCTGCTGGTG GATGA
|
|---|
| Protein sequence | MLRPATLCIA LFFCLLLPFS ALARPIIVGG DRDYPPYEFL DPNGKPAGYN VELTRAIAEV
MGLQVEFRLG GWSEQLRDLK EGRIDLLQGI SWSEQRAAQI DFIPPHTVVN HAIFARRESP
VVSSLAELKG KKVTLHRDGI MHEQLSRLGY GPDLVPTSTP ADALRLLAAG GCDYAVVAIV
PGMYIIREYK LTNLVPVARS IAAQKYGHAV RKGNGELQAK LTEGLAILKK TGQYDEIHTR
WLGVLEPEGL AIAKAIRLAA LVVVPLLLVL GGMAFWSRSL HQQVALRTAD LTREIAERTT
AEQELRRNQQ QLVQADKMAA LGVLVSGVAH EINNPNGLIL LNMPILKDVC ADALELLEQH
CPDQDQIRLG GLPYRRIRQE LPQMLDEMQD GARRIKRIVE DLKDFARQDD AALMEPLNLN
HVVQAAVRLV ERSLRTATNR FEAEYAEPLP LVQGNSQRIE QILVNLLLNA CQALTDQNRG
IFLRTFIDHA TNSVGVSVRD EGCGIAPEHL DRLTDPFFTT KRESGGTGLG LSVSAGIVKE
HGGSLQFSSP PGQGTTVTLL LPIHTEAPHH VWNPVSRLWY PAGG
|
|---|
| |