Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3500 |
Symbol | |
ID | 6369327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3758422 |
End bp | 3759987 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642678917 |
Product | phosphodiesterase |
Protein accession | YP_001953723 |
Protein GI | 189426546 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000584399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACCA GTATCGTCAT GGCGTTGGTG ATCGTTGCGG TCGCCGGTGT AGCGTATGTC GCAGGCAACC GTTTTGGACG CAAAAGCACT GAGGGACTTG TAGCTCAGGC GGAAGAGTTG GCAGCACGCC TGCTTGAAGA TGCCCGTCGT GAAGCAGACA ACATCGCAAA AGAGGCTGAA CTGAAGGCAA AGAACGCGGC CCTTGAAGCT AAAGAGGCTG CTGAAGGTGA ATTAAAAGAA AAAAAGCGTG AAATTCAGGT ACAGGAAAAA AGGATACAGC AGAAGGAAGA GCATCTGGAC AAAAAATCAG CTCTGGTCGA CCAAAAAGAG ATGGACCTGC TGAAGAAAGA ACAGTCCGTA TCTACAAAAG AACAGGCATT AGCCGCAAAG GAAGATGAAC TGACAAAGGC CGCTAGTGAG CAGCGTGCCC GACTTGAGCA GATCTCCGGC ATGTCCGCAG AAGAGGCAAA AAACACACTG ATTGAAGCGA TGGAGAGTGA GGCCAAGCAT GACGCGGCCA AACGGATCAA ACTGATTGAG GAAGAAGCCA AGGAAACTGC TGACAAGAAG GCAAAGGAGA TCATCGCAGC GGCGATTCAA CGTTATGCCG GCGAGTATGT CTCTGAAAAA TGCGTCTCAG TGGTACCGCT GCCGTCTGAT GAAATGAAAG GCCGGATTAT CGGGCGTGAA GGCCGCAACA TCCGTGCACT GGAGGCTGCC ACCGGTATAG ACCTGATCAT TGATGACACC CCTGAAGCGG TAATCCTGTC CGGCTTCAAC CCGGTCCGCC GTGAGGTTGC CCGTCTGTCG CTGGAAAAAC TGCTGGCCGA TGGCCGGATT CATCCGGGCC GGATCGAAGA GGTGGTTGCA AAATCTGAAG AAGAGGTTGA AAAGGCGATC AAGGAGGCTG GCGAACAGGC CGCCTTTGAC CTGGGTGTAC ATGGCATCCA TCCTGAGGTG CTCAAGCTGA TCGGCCGCCT CAAATACCGC ACCTCGTACA CTCAGAACGT CTATCAACAC TCCCTTGAAG TTGCCTTCCT GTGCGGTATC ATGGCCGCCG AACTGGGGAT CAACGTCAAG CAGGCCAAGC GGGCCGGCCT GCTGCATGAC CTGGGCAAGG CGGTTGACCA TGAGGTTGAA GGTTCCCATG CCGTCATCGG CGCTGATCTG GCACGTAAAT ACGGGGAATC ACCAAAGATT GTCCATGCCA TTGCGGCTCA CCATGAAGAC GAAAAACCCT CCACGATCCT GGCGGTACTG GTACAGGCAG CCGATGCCCT CTCCGGGGCA CGCCCGGGTG CACGGCGCGA GATGATGGAA TCCTATGTCA AGCGGCTGGA AGACCTGGAG CGGATCGCCA CCTCCTTTAA CGGTGTCAGC GGTTCCTTTG CCATCCAGGC CGGTCGCGAG ATCCGGGTCA TGGTCTCCAG CGATCAGGTT TCCGACGAAC AATCGGTACT GCTGGCACGG GATATTGCCA AAAAGATCGA GAGCGAGATG ACCTACCCCG GCATGATCAA GGTCAATGTG ATTCGTGAAA CGCGCGCCAC AGAGTTTGCA CGGTAA
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Protein sequence | MITSIVMALV IVAVAGVAYV AGNRFGRKST EGLVAQAEEL AARLLEDARR EADNIAKEAE LKAKNAALEA KEAAEGELKE KKREIQVQEK RIQQKEEHLD KKSALVDQKE MDLLKKEQSV STKEQALAAK EDELTKAASE QRARLEQISG MSAEEAKNTL IEAMESEAKH DAAKRIKLIE EEAKETADKK AKEIIAAAIQ RYAGEYVSEK CVSVVPLPSD EMKGRIIGRE GRNIRALEAA TGIDLIIDDT PEAVILSGFN PVRREVARLS LEKLLADGRI HPGRIEEVVA KSEEEVEKAI KEAGEQAAFD LGVHGIHPEV LKLIGRLKYR TSYTQNVYQH SLEVAFLCGI MAAELGINVK QAKRAGLLHD LGKAVDHEVE GSHAVIGADL ARKYGESPKI VHAIAAHHED EKPSTILAVL VQAADALSGA RPGARREMME SYVKRLEDLE RIATSFNGVS GSFAIQAGRE IRVMVSSDQV SDEQSVLLAR DIAKKIESEM TYPGMIKVNV IRETRATEFA R
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