Gene Glov_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_3500 
Symbol 
ID6369327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp3758422 
End bp3759987 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content55% 
IMG OID642678917 
Productphosphodiesterase 
Protein accessionYP_001953723 
Protein GI189426546 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000584399 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACCA GTATCGTCAT GGCGTTGGTG ATCGTTGCGG TCGCCGGTGT AGCGTATGTC 
GCAGGCAACC GTTTTGGACG CAAAAGCACT GAGGGACTTG TAGCTCAGGC GGAAGAGTTG
GCAGCACGCC TGCTTGAAGA TGCCCGTCGT GAAGCAGACA ACATCGCAAA AGAGGCTGAA
CTGAAGGCAA AGAACGCGGC CCTTGAAGCT AAAGAGGCTG CTGAAGGTGA ATTAAAAGAA
AAAAAGCGTG AAATTCAGGT ACAGGAAAAA AGGATACAGC AGAAGGAAGA GCATCTGGAC
AAAAAATCAG CTCTGGTCGA CCAAAAAGAG ATGGACCTGC TGAAGAAAGA ACAGTCCGTA
TCTACAAAAG AACAGGCATT AGCCGCAAAG GAAGATGAAC TGACAAAGGC CGCTAGTGAG
CAGCGTGCCC GACTTGAGCA GATCTCCGGC ATGTCCGCAG AAGAGGCAAA AAACACACTG
ATTGAAGCGA TGGAGAGTGA GGCCAAGCAT GACGCGGCCA AACGGATCAA ACTGATTGAG
GAAGAAGCCA AGGAAACTGC TGACAAGAAG GCAAAGGAGA TCATCGCAGC GGCGATTCAA
CGTTATGCCG GCGAGTATGT CTCTGAAAAA TGCGTCTCAG TGGTACCGCT GCCGTCTGAT
GAAATGAAAG GCCGGATTAT CGGGCGTGAA GGCCGCAACA TCCGTGCACT GGAGGCTGCC
ACCGGTATAG ACCTGATCAT TGATGACACC CCTGAAGCGG TAATCCTGTC CGGCTTCAAC
CCGGTCCGCC GTGAGGTTGC CCGTCTGTCG CTGGAAAAAC TGCTGGCCGA TGGCCGGATT
CATCCGGGCC GGATCGAAGA GGTGGTTGCA AAATCTGAAG AAGAGGTTGA AAAGGCGATC
AAGGAGGCTG GCGAACAGGC CGCCTTTGAC CTGGGTGTAC ATGGCATCCA TCCTGAGGTG
CTCAAGCTGA TCGGCCGCCT CAAATACCGC ACCTCGTACA CTCAGAACGT CTATCAACAC
TCCCTTGAAG TTGCCTTCCT GTGCGGTATC ATGGCCGCCG AACTGGGGAT CAACGTCAAG
CAGGCCAAGC GGGCCGGCCT GCTGCATGAC CTGGGCAAGG CGGTTGACCA TGAGGTTGAA
GGTTCCCATG CCGTCATCGG CGCTGATCTG GCACGTAAAT ACGGGGAATC ACCAAAGATT
GTCCATGCCA TTGCGGCTCA CCATGAAGAC GAAAAACCCT CCACGATCCT GGCGGTACTG
GTACAGGCAG CCGATGCCCT CTCCGGGGCA CGCCCGGGTG CACGGCGCGA GATGATGGAA
TCCTATGTCA AGCGGCTGGA AGACCTGGAG CGGATCGCCA CCTCCTTTAA CGGTGTCAGC
GGTTCCTTTG CCATCCAGGC CGGTCGCGAG ATCCGGGTCA TGGTCTCCAG CGATCAGGTT
TCCGACGAAC AATCGGTACT GCTGGCACGG GATATTGCCA AAAAGATCGA GAGCGAGATG
ACCTACCCCG GCATGATCAA GGTCAATGTG ATTCGTGAAA CGCGCGCCAC AGAGTTTGCA
CGGTAA
 
Protein sequence
MITSIVMALV IVAVAGVAYV AGNRFGRKST EGLVAQAEEL AARLLEDARR EADNIAKEAE 
LKAKNAALEA KEAAEGELKE KKREIQVQEK RIQQKEEHLD KKSALVDQKE MDLLKKEQSV
STKEQALAAK EDELTKAASE QRARLEQISG MSAEEAKNTL IEAMESEAKH DAAKRIKLIE
EEAKETADKK AKEIIAAAIQ RYAGEYVSEK CVSVVPLPSD EMKGRIIGRE GRNIRALEAA
TGIDLIIDDT PEAVILSGFN PVRREVARLS LEKLLADGRI HPGRIEEVVA KSEEEVEKAI
KEAGEQAAFD LGVHGIHPEV LKLIGRLKYR TSYTQNVYQH SLEVAFLCGI MAAELGINVK
QAKRAGLLHD LGKAVDHEVE GSHAVIGADL ARKYGESPKI VHAIAAHHED EKPSTILAVL
VQAADALSGA RPGARREMME SYVKRLEDLE RIATSFNGVS GSFAIQAGRE IRVMVSSDQV
SDEQSVLLAR DIAKKIESEM TYPGMIKVNV IRETRATEFA R