Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3444 |
Symbol | |
ID | 6367375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3703720 |
End bp | 3705717 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642678862 |
Product | excinuclease ABC subunit B |
Protein accession | YP_001953668 |
Protein GI | 189426491 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00237393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT TCAAGTTAGC AACCACCTAC ACCCCCAGCG GTGACCAGCC CCAGGCGATT GATGAACTGG TGGCCGGGAT CGAGCGGGGC GACAAGCATC AGGTGTTGCT GGGGGTGACC GGCTCCGGCA AGACCTTTAC CGTTGCCAAT GTCATCGCCC GCACCGGCCG TCCGGCCCTG GTGCTGGCCC CCAACAAAAC CCTGGCAGCC CAGCTTTACG GCGAATTCAA GGAACTGTTC CCGGATAACG CCGTGGAATA TTTCGTTTCC TACTACGACT ACTACCAGCC TGAGGCCTAC CTGCCCAATA CGGATACCTT CATTGAGAAG GACTCATCGA TCAACGACGA GATCGACAAG CTGCGCCACT CTGCCACCAT GTCGTTGCTG ACCCGCCCGG ATGTGATCAT CGTGGCCTCA GTCTCCTGCA TCTACGGTAT CGGCTCACCC GAGGCCTACC AGGCCATGCA TATCTTCTTT CACCAGGGGG ATGACTACGG CCGCGACACT CTGCTGAAGA AGCTGGTGGA GATCCAGTAT GAACGGAACG ACACCGACTT TCACCGCGGC ACCTTCCGGG TGCGGGGGGA TGTGATCGAG ATCTTTCCGG CCTACGACAG TGAGCGGGCG CTGCGGATCG AGTTCTTTGG TGATGAGGTG GAGACGATCT CCCAGATTGA TCCGCTGCGC GGCGTGGTGC TGCAAAAGCT GACCAAGGTA TCGATCTTCC CGGCCTCGCA CTATGTCTCC AGCAAAGAAA ATCTGGAACG TTCGGTGGCC CAGATCAGGC TGGACCTGGA GGAGCGGATC AGGCTGTTTA AAGACCAGGG CAAGCTGCTG GAGGCCCAGC GGATTGAGCA GCGTACCTAC TATGATATTG AGATGATGGA GGAGATGGGC TTTTGTCAGG GGATTGAGAA CTATTCCCGC TACCTGGACA ATCGCCAGCC AGGCGAGCCC CCCTTTACCC TGATTGATTA TTTCCCCAAG GATTTCATCC TGTTTGTGGA TGAATCCCAC ATCACCAACG CACAGGTCGG CGGCATGTAC CGCGGCGATC GCAGTCGCAA GGAGACCCTG GTGGAGTACG GCTTCCGCCT GCCGGCTGCC CTGGATAACC GCCCGCTTAA TTTTCAGGAA TTTGAGTCGC GCATCAACCA GGTGGTGCAT GTCTCGGCCA CCCCGGCAGA TTACGAGTTG CAACAGGCCG GCGGAGTCTT TGTGGAACAG GTCATCCGCC CCACCGGCCT GGTTGATCCA CAGATTGAGA TCCGTCCGGC TGCCGGACAG GTGGATGACC TGCTGCACGA GGTACGGCTG ACCGTGGCCA AAGGGGACCG GGTGCTGGTC ACCACCCTGA CCAAACGGAT GGCCGAGGAG TTGACCAACT ACTATCAGGA ACTGGGAGTA CGGGTACGCT ACCTGCATTC CGACATTGAT ACCATTGAGC GGATGCAGAT CCTGCGATCT CTGCGTCTGG GGGAATTTGA CGTACTGGTG GGTATCAACC TGCTGCGGGA GGGACTGGAT CTGCCTGAGG TCTCACTGGT GGCAATTCTT GACGCGGACA AGGAAGGCTT CCTGCGTTCG GCCCGTTCCC TGATCCAGAC CTGCGGCCGG GCTGCCCGGA ATGTTGACGG CAGGGTGCTG ATGTACGCCG ATCAGGTGAC CCGCTCCATG CAGGCCTGTC TTGACGAAAC CGGACGCCGC CGCAGCAAGC AGCTGGCCTA TAACCAGGAA CACGGCATTA CCCCCGAGAC CGTCAGGAAG GGGATGCGCA GCATACTGGA ATCGATTGCG GAAAAGGATT ATGTCACCCC GCCGGTGGTG GCAGATCTGG AAGAAGCCTA CGGGATAGAG CTGAAGGAAA TTCCCAAGCT GATCAAGAAG ATGCGCAAGG AGATGTTGGC TGCCGCCAAA GAGCTGGACT TCGAGAAGGC GGCAGAGCTG CGGGACCGGA TCAAGCAGCT GGAGGATGCA GAGCTGAAAC TGCGTTAA
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Protein sequence | MSDFKLATTY TPSGDQPQAI DELVAGIERG DKHQVLLGVT GSGKTFTVAN VIARTGRPAL VLAPNKTLAA QLYGEFKELF PDNAVEYFVS YYDYYQPEAY LPNTDTFIEK DSSINDEIDK LRHSATMSLL TRPDVIIVAS VSCIYGIGSP EAYQAMHIFF HQGDDYGRDT LLKKLVEIQY ERNDTDFHRG TFRVRGDVIE IFPAYDSERA LRIEFFGDEV ETISQIDPLR GVVLQKLTKV SIFPASHYVS SKENLERSVA QIRLDLEERI RLFKDQGKLL EAQRIEQRTY YDIEMMEEMG FCQGIENYSR YLDNRQPGEP PFTLIDYFPK DFILFVDESH ITNAQVGGMY RGDRSRKETL VEYGFRLPAA LDNRPLNFQE FESRINQVVH VSATPADYEL QQAGGVFVEQ VIRPTGLVDP QIEIRPAAGQ VDDLLHEVRL TVAKGDRVLV TTLTKRMAEE LTNYYQELGV RVRYLHSDID TIERMQILRS LRLGEFDVLV GINLLREGLD LPEVSLVAIL DADKEGFLRS ARSLIQTCGR AARNVDGRVL MYADQVTRSM QACLDETGRR RSKQLAYNQE HGITPETVRK GMRSILESIA EKDYVTPPVV ADLEEAYGIE LKEIPKLIKK MRKEMLAAAK ELDFEKAAEL RDRIKQLEDA ELKLR
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