Gene Glov_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_3444 
Symbol 
ID6367375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp3703720 
End bp3705717 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content58% 
IMG OID642678862 
Productexcinuclease ABC subunit B 
Protein accessionYP_001953668 
Protein GI189426491 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00237393 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATT TCAAGTTAGC AACCACCTAC ACCCCCAGCG GTGACCAGCC CCAGGCGATT 
GATGAACTGG TGGCCGGGAT CGAGCGGGGC GACAAGCATC AGGTGTTGCT GGGGGTGACC
GGCTCCGGCA AGACCTTTAC CGTTGCCAAT GTCATCGCCC GCACCGGCCG TCCGGCCCTG
GTGCTGGCCC CCAACAAAAC CCTGGCAGCC CAGCTTTACG GCGAATTCAA GGAACTGTTC
CCGGATAACG CCGTGGAATA TTTCGTTTCC TACTACGACT ACTACCAGCC TGAGGCCTAC
CTGCCCAATA CGGATACCTT CATTGAGAAG GACTCATCGA TCAACGACGA GATCGACAAG
CTGCGCCACT CTGCCACCAT GTCGTTGCTG ACCCGCCCGG ATGTGATCAT CGTGGCCTCA
GTCTCCTGCA TCTACGGTAT CGGCTCACCC GAGGCCTACC AGGCCATGCA TATCTTCTTT
CACCAGGGGG ATGACTACGG CCGCGACACT CTGCTGAAGA AGCTGGTGGA GATCCAGTAT
GAACGGAACG ACACCGACTT TCACCGCGGC ACCTTCCGGG TGCGGGGGGA TGTGATCGAG
ATCTTTCCGG CCTACGACAG TGAGCGGGCG CTGCGGATCG AGTTCTTTGG TGATGAGGTG
GAGACGATCT CCCAGATTGA TCCGCTGCGC GGCGTGGTGC TGCAAAAGCT GACCAAGGTA
TCGATCTTCC CGGCCTCGCA CTATGTCTCC AGCAAAGAAA ATCTGGAACG TTCGGTGGCC
CAGATCAGGC TGGACCTGGA GGAGCGGATC AGGCTGTTTA AAGACCAGGG CAAGCTGCTG
GAGGCCCAGC GGATTGAGCA GCGTACCTAC TATGATATTG AGATGATGGA GGAGATGGGC
TTTTGTCAGG GGATTGAGAA CTATTCCCGC TACCTGGACA ATCGCCAGCC AGGCGAGCCC
CCCTTTACCC TGATTGATTA TTTCCCCAAG GATTTCATCC TGTTTGTGGA TGAATCCCAC
ATCACCAACG CACAGGTCGG CGGCATGTAC CGCGGCGATC GCAGTCGCAA GGAGACCCTG
GTGGAGTACG GCTTCCGCCT GCCGGCTGCC CTGGATAACC GCCCGCTTAA TTTTCAGGAA
TTTGAGTCGC GCATCAACCA GGTGGTGCAT GTCTCGGCCA CCCCGGCAGA TTACGAGTTG
CAACAGGCCG GCGGAGTCTT TGTGGAACAG GTCATCCGCC CCACCGGCCT GGTTGATCCA
CAGATTGAGA TCCGTCCGGC TGCCGGACAG GTGGATGACC TGCTGCACGA GGTACGGCTG
ACCGTGGCCA AAGGGGACCG GGTGCTGGTC ACCACCCTGA CCAAACGGAT GGCCGAGGAG
TTGACCAACT ACTATCAGGA ACTGGGAGTA CGGGTACGCT ACCTGCATTC CGACATTGAT
ACCATTGAGC GGATGCAGAT CCTGCGATCT CTGCGTCTGG GGGAATTTGA CGTACTGGTG
GGTATCAACC TGCTGCGGGA GGGACTGGAT CTGCCTGAGG TCTCACTGGT GGCAATTCTT
GACGCGGACA AGGAAGGCTT CCTGCGTTCG GCCCGTTCCC TGATCCAGAC CTGCGGCCGG
GCTGCCCGGA ATGTTGACGG CAGGGTGCTG ATGTACGCCG ATCAGGTGAC CCGCTCCATG
CAGGCCTGTC TTGACGAAAC CGGACGCCGC CGCAGCAAGC AGCTGGCCTA TAACCAGGAA
CACGGCATTA CCCCCGAGAC CGTCAGGAAG GGGATGCGCA GCATACTGGA ATCGATTGCG
GAAAAGGATT ATGTCACCCC GCCGGTGGTG GCAGATCTGG AAGAAGCCTA CGGGATAGAG
CTGAAGGAAA TTCCCAAGCT GATCAAGAAG ATGCGCAAGG AGATGTTGGC TGCCGCCAAA
GAGCTGGACT TCGAGAAGGC GGCAGAGCTG CGGGACCGGA TCAAGCAGCT GGAGGATGCA
GAGCTGAAAC TGCGTTAA
 
Protein sequence
MSDFKLATTY TPSGDQPQAI DELVAGIERG DKHQVLLGVT GSGKTFTVAN VIARTGRPAL 
VLAPNKTLAA QLYGEFKELF PDNAVEYFVS YYDYYQPEAY LPNTDTFIEK DSSINDEIDK
LRHSATMSLL TRPDVIIVAS VSCIYGIGSP EAYQAMHIFF HQGDDYGRDT LLKKLVEIQY
ERNDTDFHRG TFRVRGDVIE IFPAYDSERA LRIEFFGDEV ETISQIDPLR GVVLQKLTKV
SIFPASHYVS SKENLERSVA QIRLDLEERI RLFKDQGKLL EAQRIEQRTY YDIEMMEEMG
FCQGIENYSR YLDNRQPGEP PFTLIDYFPK DFILFVDESH ITNAQVGGMY RGDRSRKETL
VEYGFRLPAA LDNRPLNFQE FESRINQVVH VSATPADYEL QQAGGVFVEQ VIRPTGLVDP
QIEIRPAAGQ VDDLLHEVRL TVAKGDRVLV TTLTKRMAEE LTNYYQELGV RVRYLHSDID
TIERMQILRS LRLGEFDVLV GINLLREGLD LPEVSLVAIL DADKEGFLRS ARSLIQTCGR
AARNVDGRVL MYADQVTRSM QACLDETGRR RSKQLAYNQE HGITPETVRK GMRSILESIA
EKDYVTPPVV ADLEEAYGIE LKEIPKLIKK MRKEMLAAAK ELDFEKAAEL RDRIKQLEDA
ELKLR