| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3435 |
|---|
| Symbol | |
|---|
| ID | 6366115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3693290 |
|---|
| End bp | 3694489 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642678853 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_001953659 |
|---|
| Protein GI | 189426482 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.169321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CCAGCTATGT ACGACTGATG ACTGCCGTAG TGTTGGTGGC AGTAGGACTT
ACCACAGCGG CCTGCGGTAA AAAGCAGGCT GCCATGCCGC CTTCAGGGCC ACCGGAGGTT
GGTGTCATCA CGGTTCAGCC CCAGCGTGTA GCGTTGACAA CCGAACTGTC CGGTCGAACC
GCTCCACATC TGATTGCCGA GGTCCGTCCC CAGGTGGGCG GTATCATCAA GAAGCGCCTC
TTCACCGAAG GCAGCGACGT CAAGGCAGGT CAGGTGCTGT ACCAGATCGA TCCGGCCAGC
TATGAAGCTG CCCATGCCAG TGCCCGGGCA AGCCAGGCAC GGGCCGAGGC AACCTTGGGT
ATGGTTCGCC TGAAGGCGGA ACGCTATCAG GATCTGGTCA AGATCAAGGC GGTCAGCCAG
CAGGATAACG ACGACGCCCA GGCAGCCCTC AAGCAGGCTG AGGCAGATCT TGCTGCCGCA
AAGGCAGCAG TGGAGACCGC CCGGATCAAC CTGGCCTATA CCAAGATCAC CGCGCCTATT
TCAGGCCGGA TCGGGCGTTC GTCAATTACC GATGGCGCAC TGGTGACGGC CAACCAGGCC
ACTGCCCTGG CAACTATCCA AAAACTGGAC ACTATGTATG TGGATGTGAC GCAATCAAGC
GCCGAACTGC TCCGGCTGAA GCAGACTCTG GCCAGTGGCG TACTGAAGAA GGATACAGCG
ACGGCCCAGG CCCGAGTCAA GCTGGTGCTG GAAGACGGTT CTCCCTATCC GTTGCCCGGC
ACCCTAAAAT TCTCCGAGGT CACGGTTGAC CAGAGTACCG GTTCCATCAC CTTACGGGCG
GTATTTCCCA ACCCGAAACA GGTGCTGCTG CCCGGCATGT TTGTACGGGC CGTGCTGGAG
GAGGGGGTAA ATGAGCAAGC GATGCTGGTG CCTCAGCGTG GTGTGACCCG TAACCCCAAA
GGGGATGCCG TCGTGATGAT GGTAGGTGCT GAAGAAAAAG TTGAGCCGCG AGTGATTCAG
GTCGTGCGGA CGGTTGGCGA GAACTGGCTG GTATCCGATG GCTTGAAACC GGGCGACCGG
GTGATTCTGG AAGGACTCCA GAAAGCTCGC CCCGGTACGC CGGTCAAGGC AGTGCCGTTC
GGCGTAAAAC CGGCAGCAGC CCCTGGCCCG CAACAGCAAC CTGCAGCAGC TAAAAAGTAA
|
|---|
| Protein sequence | MKQTSYVRLM TAVVLVAVGL TTAACGKKQA AMPPSGPPEV GVITVQPQRV ALTTELSGRT
APHLIAEVRP QVGGIIKKRL FTEGSDVKAG QVLYQIDPAS YEAAHASARA SQARAEATLG
MVRLKAERYQ DLVKIKAVSQ QDNDDAQAAL KQAEADLAAA KAAVETARIN LAYTKITAPI
SGRIGRSSIT DGALVTANQA TALATIQKLD TMYVDVTQSS AELLRLKQTL ASGVLKKDTA
TAQARVKLVL EDGSPYPLPG TLKFSEVTVD QSTGSITLRA VFPNPKQVLL PGMFVRAVLE
EGVNEQAMLV PQRGVTRNPK GDAVVMMVGA EEKVEPRVIQ VVRTVGENWL VSDGLKPGDR
VILEGLQKAR PGTPVKAVPF GVKPAAAPGP QQQPAAAKK
|
|---|
| |