| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3375 |
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| Symbol | |
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| ID | 6368637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3625528 |
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| End bp | 3626448 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642678795 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001953601 |
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| Protein GI | 189426424 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.110631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCT CCGTTATTCC GTACAATCAA TATGAAGCTC AGAACGCCTA CCAGCGTCTG
AGGACCTGTT TGTCACGAGA GTCCGCGGAG GCGATCGCGG AGATCAAGAC TTTCCTGAAG
ATGTTTCCGG ATGTACCGCT TGCCCATAAC GATCTGGGGG TGCTCTATCA CCAGTCCGGT
AATGACCTGC TTGCGCTGGC CCATTACGAG AAGGCCAATC GGCTGCAACC GAATAATCCG
ACCGTTATCA AGAATCTGGC AGAATTCTAC TTTGTCGTCC TGGGCTGGAC CGACGATGCG
ATTGAGATGC TGACGGAACT GCTGAACGCC TGGCCGAATG ACTTTGAGAT CCTGACCGCT
TTGGGTAATA TCAGTGAGAC GGTCGGCCAG CCTGAAGAAG CACGGGCCTT TTACCGTAAA
GCCAACCAGC TGGAGCCGGG CAATGCTGAG GTGAGGGAGA TCCTGGCCCG TCTGGACGGG
CCGGTTTCGG CGGCAGAATA CCGTCAGCCT GCATTGTTGC CACAGCAGGA TGAGGAGCTG
GCACCCCTGC AACAGTTGTT GGCCCAAAAT CCTGCCAGCG CACTGGCCCA CAATAACCTG
GGCATTGTCT ACAGCCGGCG GGGGGAGTAT GACCAAGCCC GTTTTCACCA TGAACAGGCG
GTGAAGTGTG AACCGGCAAA TCTTATGTAT CGCAAGAACC TGGCAGACTT GTACTATACA
GCCTGTGGGA TGATTGATGA GGCGGTTGAA ATCTATACCC AGCTGATAAA GGAATATCCC
AATGATGTTG AGGTGCTGAC AGCGCTGGCA ATCTTCTCTA AGGAAGCGAA ACTGCCTGAA
CAGTCTCGCA TATTTATTAA CAAGGTGCTT GCCTTGCAAC CGTGGAATAC TGAAGCCCGG
ACTTTTCTGT CCGGCGTCTG A
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| Protein sequence | MTTSVIPYNQ YEAQNAYQRL RTCLSRESAE AIAEIKTFLK MFPDVPLAHN DLGVLYHQSG
NDLLALAHYE KANRLQPNNP TVIKNLAEFY FVVLGWTDDA IEMLTELLNA WPNDFEILTA
LGNISETVGQ PEEARAFYRK ANQLEPGNAE VREILARLDG PVSAAEYRQP ALLPQQDEEL
APLQQLLAQN PASALAHNNL GIVYSRRGEY DQARFHHEQA VKCEPANLMY RKNLADLYYT
ACGMIDEAVE IYTQLIKEYP NDVEVLTALA IFSKEAKLPE QSRIFINKVL ALQPWNTEAR
TFLSGV
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