Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3368 |
Symbol | |
ID | 6368659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3614315 |
End bp | 3616105 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642678788 |
Product | Tetratricopeptide domain protein |
Protein accession | YP_001953594 |
Protein GI | 189426417 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCAA GCGATTCTTG CTCTCCCCTG TTTGCAGGGG CAGCAGCCCT GCTTGAGAAA CGTTTTGCCC AGGCGACCTC CCTCGTCTCC AGCGGCAACT ATCAGCAGGC TCTGGACATT TTTCAGGAGC TGCTTGCTGC CTGTCCGCAC GAATATACCC TGCAAAACAA CTGTGCCTGG CTGTTTGAAA AGCTTGGCCG TTATGCTGAG GCTGAGACGG CGTACCGTGG TCTGTTTGAG GAGATGCCGG GCTATGCAAA CGGGGCGCTC GGCTATGCCA GGATGCTGGA GCAGGGCAAA CGGTATGTTG CTGCCGTGAC GGCCCTGCGC CGGTCGGTTG CTGCCGACCC TGTCAATCCC GGATTGTTGT CCGGTCTGGG GAATGCCCTG GTCATGGCCG GTGAGGCAGA AGCGGCCCTG CTCTGGTATG GCCTCTCAGT GGAGCTTGAC CGGCACGCCC GGGCCACTGT CAGTAATTTG CTCTATACCT TGCTGATGGT TCGTACCATT GCGCCGCAGG TTGTTGCCCG GGAACTGGAC ATGTGTGCAG CAGTTCCGGG ACTGGCCGTG CGGATCAGCA GGGTGGCAAA ACAGCTCCAT AGTCTAAGCG GTGAATTCAT CGCCGGCATG CATCGCCGGT TTGAGGAAAC ATGCCGGATT GAGACAGCAC CGGCGCCACC CTTGAGCCCT GGTACACGTA AGCGGATCAG GATCGGCTAT CTCTCTGCCG ATCTGTACGC CCATCCCGTG GGTTATTTTC TGGAAGGGGT GATTCCGGCC CATGACCGGA ATCGCTTTGA GATCGTGGTT TTTTCACCCT ATACAGAGCG GGATGAGCTG ACTGCGGCCC TGAAACGCTC AGCAGAACAT TGGGTTGTGC TGCATGGCAC TGACCGCCTG GAGATCGTAC GCCAGATCCG CGCCTGGCAG CTCGATATTG CGGTAGACAT GGCGGGCCAT ACCGGGGGGA ATTACCTTGA CCTCTTTGCC CGGAGACTGG CCCCGCTGCA GATCACCTGG GGAGGCTATC CGGGGAGTAC CGGCCTGGAG GCGATGGATC ATATCCTTGC CGATCAGGTG GCATTACCGC CGGAAGATCG CCCGTACTAT ACGGAACGCC CGCTCTACCT GCCCCACGGC TATGTCAGCT TCCGACCCCC TGCGGATGCG CCGCTGGTAG GGAGCTTGCC TGCACTGACA ACCGGATGCA TCACCTTTGG GTCATTCAAT ACAGTGCAAA AGCTAAACAG CAGCACCCTT GCGCTCTGGG GGGCGGTGCT GCGTGCCCTG CCCGGATCGC GGCTGTTCCT GAAGTCAAAG GGATTTGATG ACCCCTTGGT CCGCAGCGCT TATTGGGAAA AACTGGCAGC TGAAGGGGTG TCGTCAGACC GGATCCTGCT GGAGGGGTAT GCCCCCCGTA GAGAGCTGTT GGCAGCCTAT CATCAGGTTG ATATCGCATT GGATCCGGTT CCCTATCAAG GGGGGGTGAC CGTTCTTGAG GCACTCTGGA TGGGGGTGCC GACCCTGGTG TTACGCGGCA AGCGGCCGCC TTTTGTGCGC CATGCCGAGA GTCATCTCAC GCAGGCGGGG GTGGCAGACT GGATCGTTGC CAGTGAGGAT GCCTATGTTG CTACAGCGCT TGCCTGGGGC AGTAATCTGG CCGGTCTGTC TACCCTGCGA AGCCGTCTGC GGCAGCAGAT GGCAGCATCG CCGATCTGCG ATACGGTTGC GTTTACCCGG GATCTTGAGG CGGCCTTTAC GCAGGTCTGG TCTGAACGGT CCAGACACTG A
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Protein sequence | MNASDSCSPL FAGAAALLEK RFAQATSLVS SGNYQQALDI FQELLAACPH EYTLQNNCAW LFEKLGRYAE AETAYRGLFE EMPGYANGAL GYARMLEQGK RYVAAVTALR RSVAADPVNP GLLSGLGNAL VMAGEAEAAL LWYGLSVELD RHARATVSNL LYTLLMVRTI APQVVARELD MCAAVPGLAV RISRVAKQLH SLSGEFIAGM HRRFEETCRI ETAPAPPLSP GTRKRIRIGY LSADLYAHPV GYFLEGVIPA HDRNRFEIVV FSPYTERDEL TAALKRSAEH WVVLHGTDRL EIVRQIRAWQ LDIAVDMAGH TGGNYLDLFA RRLAPLQITW GGYPGSTGLE AMDHILADQV ALPPEDRPYY TERPLYLPHG YVSFRPPADA PLVGSLPALT TGCITFGSFN TVQKLNSSTL ALWGAVLRAL PGSRLFLKSK GFDDPLVRSA YWEKLAAEGV SSDRILLEGY APRRELLAAY HQVDIALDPV PYQGGVTVLE ALWMGVPTLV LRGKRPPFVR HAESHLTQAG VADWIVASED AYVATALAWG SNLAGLSTLR SRLRQQMAAS PICDTVAFTR DLEAAFTQVW SERSRH
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