Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3327 |
Symbol | |
ID | 6365923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3561810 |
End bp | 3563891 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642678747 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001953553 |
Protein GI | 189426376 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.166514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGATA CCAGCATACC CTACAAACAG GTTTTTTCAG CAATCCCGGC ACCGGTGATT ATGCTGGACA CTCAGGGGCA CTTTGCCTTT GCAAACAAGG CCGCCTACCA GATTCTCCCC TCCTGCATCC CTCTCGACGA CGGGGTAAGC TGCACACCAC CAGACTGGCT TGCCACTGAA ATAGATACAT TCCTGTATCA TGCCAAAGAA GAGCATACAT TCGAACACTG CCTGCCACTT GACACGGGGC ACCGTCATAT CCAATTCACC CTGACCCGGT TGGACCAGGA CAAGCGCCAG AACGGCATCC TGATTACACT GCACGACATC AGCCGACACA AGCGGGCCGA GCAGGCCCTG CGCCTAAGCG AAGAACGGTA CCGCATGCTG GTTGAACATC AGAGTGATCT GGTTGTCAGG GTTGATATCG AAGGCAGACT GCAGTTTGCC AGCCCCTCCT TCTGCATGCT GTTCGGCATT GACGAAGAAC AGCTGGTGGG GCGGGAGCTC TGCCCGATCA TCAACAGCAG CGGTCAGGCG GTTATGAAAG AGGCCATGCA GCGCCTGGAC TGCCACCCCA AGTCCTGTTA TCACGAAATC TGCTCCCAGA CCCTGGATGG TCTCCGCTGG ATCGGCTGGG CCATGAAGGG GGTGGTGGAT GAAAAGGGCC ATATTGAGGC CATCGTCGGT ATCGGGCGCG ACATTACCGA CCGCAAAAAG GCCGAGCAGG AGATACTCCA GCTTGCCCAT TACGATACCC TGACCGGCCT GCCTAACCGC AGCCTGCTCC AGGACCGCTT GTCCCAGGCC CTTTCGCTGG CCAACCGGGG CAATGTCACC CTGGCGGTAC TTTTTCTCGA TCTGGATCGT TTTAAGCACG TCAATGACGC CTTTGGTCAC CAGATTGGCG ATCTGTTGCT GCAGGAGGTC AGCCGCCGCC TGAAAGACTG CGTGCGTGCC ACCGACACAG TATCCCGGAT CGGCGGCGAT GAGTTTGTGA TCATCCTGAC CAATCTGATC AAGTGCAGCC AGGCCGGATC AATAGCCGCC AAGATCATCA GCTCCATGAG CCGCCTCTTT CAGCTGGGAG GCCATGAACT GTACAGTGGC ACCAGCATCG GCATCGCCCT CTACCCGACA GACGGCAATG ATGTTGACAC CCTGCTGAAG CATGCCGATA TGGCCATGTA CCAGGCCAAA GCGAGTGGCC GGGGCACCTT CAAGTTCTTT TCTCCGGAAC ACAACGAGAA AATGCTGCAG CGTATGCAAC TTGAACAGGC GTTACGCCGG GCAATTGAGC ATCAGGAGCT GTCCCTTGAC TACCAGCCAC AGATCGACAG TGCAACCGGC AGCATCAACG GCCTTGAAGC CTTGCTGCGC TGGCAGCACC CCCAGCTGGG GCTGTTACTG CCGGGACTGT TCATCACCAT TGCAGAGGAA ACCGGACTGA TCATCCCGTT GGGGGAATGG GTATTACGGA CCGCCTGCAG GCAGGCACGG GCCTGGCAGC GGGCCGGCTA CCACCGGCTG CGGATAGCGG TCAACATCTC TCCGCGCCAG TTCCAGCAAC GGGGTCTGAT ACCGATGATC GACGCAATCC TGCAGGAAAC CGGCTGCGAT CCGCGCGGGC TTGAACTTGA GCTGACCGAG ACCACCCTGA TGGACAGCCC CAAGGAAGCG ACTGCCCTGC TGAAGGCGTT GAAACGCCGC GGGATCAGTC TGGCTATTGA CGATTTCGGC ACCGGCTATT CATCGCTCAG CCACCTCAAG CACTTTCCGA TCGACCGGCT CAAGATCGAC CGGTCCTTCG TCAATGATCT GACCCGCAGC CGCGAGGATA GCGCCATTGT CGAGGCAATC ATCGCCATGG CCCACCGGCT GGGGCTGGAG GTAGTGGCCG AAGGGGTGGA ACATCCTGAT CAACATGCCA TACTCAGCGA CTGGGGCTGC AAGACATGCC AGGGCTTTCT CTACAGCAAG GCCGTTTCAA CCGAAGAGGC AACGGCACTA CTAGCCACAG CTCAGTATTC CACAGGGATC CCAAGCACTT TGACGCCCCA GACAAAACCA GCAGACGATT GA
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Protein sequence | MPDTSIPYKQ VFSAIPAPVI MLDTQGHFAF ANKAAYQILP SCIPLDDGVS CTPPDWLATE IDTFLYHAKE EHTFEHCLPL DTGHRHIQFT LTRLDQDKRQ NGILITLHDI SRHKRAEQAL RLSEERYRML VEHQSDLVVR VDIEGRLQFA SPSFCMLFGI DEEQLVGREL CPIINSSGQA VMKEAMQRLD CHPKSCYHEI CSQTLDGLRW IGWAMKGVVD EKGHIEAIVG IGRDITDRKK AEQEILQLAH YDTLTGLPNR SLLQDRLSQA LSLANRGNVT LAVLFLDLDR FKHVNDAFGH QIGDLLLQEV SRRLKDCVRA TDTVSRIGGD EFVIILTNLI KCSQAGSIAA KIISSMSRLF QLGGHELYSG TSIGIALYPT DGNDVDTLLK HADMAMYQAK ASGRGTFKFF SPEHNEKMLQ RMQLEQALRR AIEHQELSLD YQPQIDSATG SINGLEALLR WQHPQLGLLL PGLFITIAEE TGLIIPLGEW VLRTACRQAR AWQRAGYHRL RIAVNISPRQ FQQRGLIPMI DAILQETGCD PRGLELELTE TTLMDSPKEA TALLKALKRR GISLAIDDFG TGYSSLSHLK HFPIDRLKID RSFVNDLTRS REDSAIVEAI IAMAHRLGLE VVAEGVEHPD QHAILSDWGC KTCQGFLYSK AVSTEEATAL LATAQYSTGI PSTLTPQTKP ADD
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