Gene Glov_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_3327 
Symbol 
ID6365923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp3561810 
End bp3563891 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content58% 
IMG OID642678747 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001953553 
Protein GI189426376 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGATA CCAGCATACC CTACAAACAG GTTTTTTCAG CAATCCCGGC ACCGGTGATT 
ATGCTGGACA CTCAGGGGCA CTTTGCCTTT GCAAACAAGG CCGCCTACCA GATTCTCCCC
TCCTGCATCC CTCTCGACGA CGGGGTAAGC TGCACACCAC CAGACTGGCT TGCCACTGAA
ATAGATACAT TCCTGTATCA TGCCAAAGAA GAGCATACAT TCGAACACTG CCTGCCACTT
GACACGGGGC ACCGTCATAT CCAATTCACC CTGACCCGGT TGGACCAGGA CAAGCGCCAG
AACGGCATCC TGATTACACT GCACGACATC AGCCGACACA AGCGGGCCGA GCAGGCCCTG
CGCCTAAGCG AAGAACGGTA CCGCATGCTG GTTGAACATC AGAGTGATCT GGTTGTCAGG
GTTGATATCG AAGGCAGACT GCAGTTTGCC AGCCCCTCCT TCTGCATGCT GTTCGGCATT
GACGAAGAAC AGCTGGTGGG GCGGGAGCTC TGCCCGATCA TCAACAGCAG CGGTCAGGCG
GTTATGAAAG AGGCCATGCA GCGCCTGGAC TGCCACCCCA AGTCCTGTTA TCACGAAATC
TGCTCCCAGA CCCTGGATGG TCTCCGCTGG ATCGGCTGGG CCATGAAGGG GGTGGTGGAT
GAAAAGGGCC ATATTGAGGC CATCGTCGGT ATCGGGCGCG ACATTACCGA CCGCAAAAAG
GCCGAGCAGG AGATACTCCA GCTTGCCCAT TACGATACCC TGACCGGCCT GCCTAACCGC
AGCCTGCTCC AGGACCGCTT GTCCCAGGCC CTTTCGCTGG CCAACCGGGG CAATGTCACC
CTGGCGGTAC TTTTTCTCGA TCTGGATCGT TTTAAGCACG TCAATGACGC CTTTGGTCAC
CAGATTGGCG ATCTGTTGCT GCAGGAGGTC AGCCGCCGCC TGAAAGACTG CGTGCGTGCC
ACCGACACAG TATCCCGGAT CGGCGGCGAT GAGTTTGTGA TCATCCTGAC CAATCTGATC
AAGTGCAGCC AGGCCGGATC AATAGCCGCC AAGATCATCA GCTCCATGAG CCGCCTCTTT
CAGCTGGGAG GCCATGAACT GTACAGTGGC ACCAGCATCG GCATCGCCCT CTACCCGACA
GACGGCAATG ATGTTGACAC CCTGCTGAAG CATGCCGATA TGGCCATGTA CCAGGCCAAA
GCGAGTGGCC GGGGCACCTT CAAGTTCTTT TCTCCGGAAC ACAACGAGAA AATGCTGCAG
CGTATGCAAC TTGAACAGGC GTTACGCCGG GCAATTGAGC ATCAGGAGCT GTCCCTTGAC
TACCAGCCAC AGATCGACAG TGCAACCGGC AGCATCAACG GCCTTGAAGC CTTGCTGCGC
TGGCAGCACC CCCAGCTGGG GCTGTTACTG CCGGGACTGT TCATCACCAT TGCAGAGGAA
ACCGGACTGA TCATCCCGTT GGGGGAATGG GTATTACGGA CCGCCTGCAG GCAGGCACGG
GCCTGGCAGC GGGCCGGCTA CCACCGGCTG CGGATAGCGG TCAACATCTC TCCGCGCCAG
TTCCAGCAAC GGGGTCTGAT ACCGATGATC GACGCAATCC TGCAGGAAAC CGGCTGCGAT
CCGCGCGGGC TTGAACTTGA GCTGACCGAG ACCACCCTGA TGGACAGCCC CAAGGAAGCG
ACTGCCCTGC TGAAGGCGTT GAAACGCCGC GGGATCAGTC TGGCTATTGA CGATTTCGGC
ACCGGCTATT CATCGCTCAG CCACCTCAAG CACTTTCCGA TCGACCGGCT CAAGATCGAC
CGGTCCTTCG TCAATGATCT GACCCGCAGC CGCGAGGATA GCGCCATTGT CGAGGCAATC
ATCGCCATGG CCCACCGGCT GGGGCTGGAG GTAGTGGCCG AAGGGGTGGA ACATCCTGAT
CAACATGCCA TACTCAGCGA CTGGGGCTGC AAGACATGCC AGGGCTTTCT CTACAGCAAG
GCCGTTTCAA CCGAAGAGGC AACGGCACTA CTAGCCACAG CTCAGTATTC CACAGGGATC
CCAAGCACTT TGACGCCCCA GACAAAACCA GCAGACGATT GA
 
Protein sequence
MPDTSIPYKQ VFSAIPAPVI MLDTQGHFAF ANKAAYQILP SCIPLDDGVS CTPPDWLATE 
IDTFLYHAKE EHTFEHCLPL DTGHRHIQFT LTRLDQDKRQ NGILITLHDI SRHKRAEQAL
RLSEERYRML VEHQSDLVVR VDIEGRLQFA SPSFCMLFGI DEEQLVGREL CPIINSSGQA
VMKEAMQRLD CHPKSCYHEI CSQTLDGLRW IGWAMKGVVD EKGHIEAIVG IGRDITDRKK
AEQEILQLAH YDTLTGLPNR SLLQDRLSQA LSLANRGNVT LAVLFLDLDR FKHVNDAFGH
QIGDLLLQEV SRRLKDCVRA TDTVSRIGGD EFVIILTNLI KCSQAGSIAA KIISSMSRLF
QLGGHELYSG TSIGIALYPT DGNDVDTLLK HADMAMYQAK ASGRGTFKFF SPEHNEKMLQ
RMQLEQALRR AIEHQELSLD YQPQIDSATG SINGLEALLR WQHPQLGLLL PGLFITIAEE
TGLIIPLGEW VLRTACRQAR AWQRAGYHRL RIAVNISPRQ FQQRGLIPMI DAILQETGCD
PRGLELELTE TTLMDSPKEA TALLKALKRR GISLAIDDFG TGYSSLSHLK HFPIDRLKID
RSFVNDLTRS REDSAIVEAI IAMAHRLGLE VVAEGVEHPD QHAILSDWGC KTCQGFLYSK
AVSTEEATAL LATAQYSTGI PSTLTPQTKP ADD