| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3271 |
|---|
| Symbol | |
|---|
| ID | 6367908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3504278 |
|---|
| End bp | 3506005 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642678691 |
|---|
| Product | glycosyl transferase family 39 |
|---|
| Protein accession | YP_001953497 |
|---|
| Protein GI | 189426320 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0147361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCC TCTACGAACA TCTGAACCAG CCGGAAGGAC ACTGGCTGCG GGACAGCATG
CTGTTGTTGA TCCTGTTTGG TTTTCTCTTC CTCGCCGGCC TCGGATCAGC ACCACTGATT
GATCCGGATG AGGGGCGCTA TGCCGAGATC CCCCGCGAAA TGCTGGTCCG GGGTGACTTT
GTTACGCCCA CACTTAATTA TGTCAAATAC TTTGAAAAGC CTCCTCTACT GTACTGGGTT
AATGCCGGTT CCATGGCGCT CTTCGGCCAG AATGAGTTTG CCGCCCGGCT CCCCTCAGCC
CTGTCCGGGC TTTTTACGGT CCTGCTGACC TACCTTGCGG GGCGTCGCTT ATTCAGCAGG
CGCATAGCAC TGATCGGCGC ATTAATCCTG GGCAGCTGTG CGGCCTTCCT GCTCCAGTCA
CGCATCATTC TGACAGACAT GCTGTTAACC CTGTGCCTTT CGGCAGCCCT GTTCAGTTTT
CTGCTTGCTG TCCGCAGCAG CCTGCGCCAT CGCACGAACC TCTACCGTCT GTTCTTTATC
TGTTGCGGAC TGGCGGTGCT GACCAAAGGT TTGATCGGCA TTGTGCTGCC AGGAGGAATC
ATTTTCTGGT ATCTGCTGCT GAGCAGACGC TGGCACCTGC TGAAGGAAAT CCCCTGGTTC
TCCGGCATGT TACTTTTTTC CCTGGTCACC GTGCCATGGT TCCTGCTGGT TTCACAGGCA
AATCCGGAGT TCCCGCATTT TTTCTTTATC AGGGAGCACT TCCAGCGCTA CACCAGCACC
ATCCATCGCC GCAGCCAGCC GTTCTGGTTC TTTCTGCCGA TCCTGCTGCT GACCATGCTA
CCCTGGTCTT TTTTCCTGCC GGGCAGCTTC ACCAAAGCCT GGCAGCAACG CCACAACAAC
AGAGGAACCA CCCTCTTTCT GTTACTCTGG CCGCTGGTTA TCATCCTGTT TTTTTCACTG
TCCAGCTCCA AGCTGATCCC GTATATCCTG CCGACCTTCC CCCCATTGGC ACTGTTACTG
GCCCACAGGA TCACGGCCCA CTGGCACACC CGCAGACCTG ACTACACAAC CGCGCAGGCA
ACGCTTGCAG CCCTACTGCT CTTGCTTGGT GCAGCTCTGG CCATACTGCC ACTGCTGACC
TGGCTCCCGC CGCTGCTGCA TGCAAGCGGT CAAACCGGCC GGGATCTGGC TGCCATGCTG
AGCGGCCCTG CACCGGTACT GACCCTGCGC CAGACCCTGC TGCCCGGCAG CCTGCTGGTT
ATCTTCGGCC TGCTGCTGCT CTGGAGCATC CGCACCCGTT CCACTCTGCT GCTGATAGGG
CTACTCTGTT GTTTCGGCAT CCTGCTTGAT CTGCTGCTTC CCTGGGCCTT TACCCGCTAC
GGTGCTGAAC GACTCTCGTC ACGCAGCCTG GCCAAGGCTG CCCTGCAGCA GAGCGGACCG
GATACGGTTC TGGCTCAAAG CGGGCCGCGT CAGGGGATGA ACTTTTACAC CGGCAAACGC
CTGATCACTG TAGGTGATGC TGATGAACTG ACCTTCGGCA GCAGCCAGGG CAACCAGTCC
GGCTGGTTCC TTTCCCAGGA GCAGTTCATG GAGCTTTGGC GTTCAAACCG TCAGGTCATG
ATTGTTATTC CCCGCCATGA GGCAAGCCGG TATGATGCAG CCCCATCCGG GCCATCGCCC
CGTACTCTGG CAGACAACGG GGCGTTGCTG TTGTTGTCCA ACCGCTGA
|
|---|
| Protein sequence | MSPLYEHLNQ PEGHWLRDSM LLLILFGFLF LAGLGSAPLI DPDEGRYAEI PREMLVRGDF
VTPTLNYVKY FEKPPLLYWV NAGSMALFGQ NEFAARLPSA LSGLFTVLLT YLAGRRLFSR
RIALIGALIL GSCAAFLLQS RIILTDMLLT LCLSAALFSF LLAVRSSLRH RTNLYRLFFI
CCGLAVLTKG LIGIVLPGGI IFWYLLLSRR WHLLKEIPWF SGMLLFSLVT VPWFLLVSQA
NPEFPHFFFI REHFQRYTST IHRRSQPFWF FLPILLLTML PWSFFLPGSF TKAWQQRHNN
RGTTLFLLLW PLVIILFFSL SSSKLIPYIL PTFPPLALLL AHRITAHWHT RRPDYTTAQA
TLAALLLLLG AALAILPLLT WLPPLLHASG QTGRDLAAML SGPAPVLTLR QTLLPGSLLV
IFGLLLLWSI RTRSTLLLIG LLCCFGILLD LLLPWAFTRY GAERLSSRSL AKAALQQSGP
DTVLAQSGPR QGMNFYTGKR LITVGDADEL TFGSSQGNQS GWFLSQEQFM ELWRSNRQVM
IVIPRHEASR YDAAPSGPSP RTLADNGALL LLSNR
|
|---|
| |