| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3268 |
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| Symbol | |
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| ID | 6367144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3501098 |
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| End bp | 3502117 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642678688 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_001953494 |
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| Protein GI | 189426317 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000361142 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTC GTATGCGGCT GGTACTGTCC CTGATGGTAA TGCTCCTGTC TGTTCCATGG
TTACTCTGGG CCGAAGAAGA GCCAACGGTC TATGTGATCC AGAAGGGTGA CACACTCTGG
GGGCTTTCCG GGAAATTCCT TAACAATCCC AATTACTGGC CGGATCTCTG GTCGAAAAAT
CAGCAGGTAA CCAACCCTCA TTTTATTTAT CCTGGCCAAA CCGTCCGCTT TGTGGATGGC
AGGCTGGAGA TCGTTGATGC CCCGGTGGAG GCCGGCGGGC AGAAGGCGGC AGCTGGCAAG
ACGGTTCAGC CGGTTCCTCA GCTTGAGGTT GCAGAGGAAA AGACCTTTAC TGTGCGCGGC
AATGAAGGCT GGTTAATGGA AAAGGATACG TTGCCGACCG GTAGAGTTAT CGCGGGACAG
CACGGCCGCC TGGTGCTTGG TGAAGATGAT ACCGTCTTCA CCGATATCGG CACCAGTCAT
GGCGGAAATG ACGGCAGTAA ATATACGATT CTGCGCAAGT CAAAACAGAT TAAACATCCG
GTGACCGGTG ATGATCTCGG TTATAAGGTC TATCCACTGG GGGCGCTACA GCTGACCCAT
GTGACGAAGC TGAATTCCCG TGGCATTATC TCAACTTCAT TTAAGGAAAT CGAACCTGGC
GATCTGTTGG TGCCCTACCA GCCGGTGAAG CGCCGGACCG TTGCCCTGAA AATGGTTTCG
CGCCCGCTGA AAGGCTATCT TGTTGAGAGC GCCACCGGTA ACACTGCACT TGCCACCGGC
GATGTGGTCT ATCTTGACCT TGGGCGTTCA GAGGGGGCAG AACCGGGCAA CCTGCTCTAT
GTCGTCCGGA AGGTGGCGAT TGAGAAGATG CTGGTGGAAC GTTATGTCGG AGAACTGCCC
AATGAAGTGG TTGGTGCGCT GGTGATTGTG GAGGTGGGCA ACAGGACCTC TACTGCCATT
GTGGTGAAAA GCATTGACGC CATTTTCAAG GGTAATGAGG TTGTCAGCGC TCCCCGTTAA
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| Protein sequence | MKSRMRLVLS LMVMLLSVPW LLWAEEEPTV YVIQKGDTLW GLSGKFLNNP NYWPDLWSKN
QQVTNPHFIY PGQTVRFVDG RLEIVDAPVE AGGQKAAAGK TVQPVPQLEV AEEKTFTVRG
NEGWLMEKDT LPTGRVIAGQ HGRLVLGEDD TVFTDIGTSH GGNDGSKYTI LRKSKQIKHP
VTGDDLGYKV YPLGALQLTH VTKLNSRGII STSFKEIEPG DLLVPYQPVK RRTVALKMVS
RPLKGYLVES ATGNTALATG DVVYLDLGRS EGAEPGNLLY VVRKVAIEKM LVERYVGELP
NEVVGALVIV EVGNRTSTAI VVKSIDAIFK GNEVVSAPR
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