| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3245 |
|---|
| Symbol | hemE |
|---|
| ID | 6366032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3473430 |
|---|
| End bp | 3474452 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642678663 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_001953471 |
|---|
| Protein GI | 189426294 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family
[TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC GTTTTCTTGA TGCCTGTTGG GGTAAGCCGG TGGACCGCAC TCCGGTCTGG
TTGATGCGTC AGGCCGGCCG TTATCTGCCT GAGTATATGG CTGTCCGTTC CCGCTGCAGC
TTTCTTGAAC TGTGCAAGAC CCCTGAACTG GCGGCAGAAG TCACCATCCA GCCGGTGGAT
ATCCTAGGTG TGGATGCCGC CATCCTCTTT TCCGATATCC TGACGCCGGT GGAGCCAATG
GGGCTGAAAC TGGACTTTGT GCCGGGTCCG GTCTTTGAGA ATCCGGTGCG GACGATGGCT
GATGTGGAGA AACTGCGCAT TCCCGACCCT GAAGCCGATG TCCCCTATGT CTTGCAGGCG
ATCAGGATCC TGCGCAAGGA GTTGGCCGGA AAGGTACCGC TGATCGGTTT TGGCGGAGCA
CCGTTTACGC TGGCCTGCTA CATGGTGGAA GGCAAAGGCT CCAAAGACTG GGCCACCATC
AAGCGGATGA TGTATGCCGC GCCTGACGTC TATGCCGCCC TGATGGAAAA AGTCACCATG
ATGGATATGG AGTACCTGAA TGCCCAGATC AGAGCCGGTG CCCAGGCGAT CCAGATCTTC
GATACCTGGG GCGGGGTACT CTCACCCACT GACTATGAAA AATACGTCCT GCCCTATACT
ACAAAACTGA TTAATGGTCT GAACCGCAAA GAGACGCCGG TCATCCATTT CGTGAAAGGT
TCCGGCACCA TGCTGCCTGT TGTACAAAAG GCTGGCGGCG ATGTCATGGG GCTGGACTGG
CACATCAATC TTGGCTCTGC CCGCGATATT CTGGGGCCAG AGATGGCAGT ACAGGGCAAC
CTTGATCCAA CCACACTCTA TGCCCCCCAT GCCGTCATCG AGCAGGAAGT GAAGCGGGTA
CTGAATGAAA ACGCCGGCCG TCCGGGTCAT ATCTTTAACC TGGGCCACGG CATTCTGCCC
ACCGTACCGC CGGAAAACGC CAAGTTCATG GTGGACTGCG TACATAGACT CTCTCAAAGG
TAA
|
|---|
| Protein sequence | MNNRFLDACW GKPVDRTPVW LMRQAGRYLP EYMAVRSRCS FLELCKTPEL AAEVTIQPVD
ILGVDAAILF SDILTPVEPM GLKLDFVPGP VFENPVRTMA DVEKLRIPDP EADVPYVLQA
IRILRKELAG KVPLIGFGGA PFTLACYMVE GKGSKDWATI KRMMYAAPDV YAALMEKVTM
MDMEYLNAQI RAGAQAIQIF DTWGGVLSPT DYEKYVLPYT TKLINGLNRK ETPVIHFVKG
SGTMLPVVQK AGGDVMGLDW HINLGSARDI LGPEMAVQGN LDPTTLYAPH AVIEQEVKRV
LNENAGRPGH IFNLGHGILP TVPPENAKFM VDCVHRLSQR
|
|---|
| |