| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3196 |
|---|
| Symbol | |
|---|
| ID | 6365965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3412967 |
|---|
| End bp | 3414595 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642678613 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001953422 |
|---|
| Protein GI | 189426245 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT CCCGTTACCG TGACCTGTTT GTCAGTGAGG CACGGGAGCA TCTGACTGCC
CTCGGTTCTT TAAGCGTGCG CTGTGAAAAG GGGGAAACCG GCTCCAGCAT CATTAACGAA
CTGTTCCGCC ATGCCCACTC TCTGAAGGGG ATGGCGGCAA CCATGCAGCT CGATCCCATC
GCCATCCTTG CCCATGCGCT GGAAGATCTG CTGGACAAGG TTCGCTCCGG CTCCCTGACC
ATCACCCGCA GTGCAGCAGA CCTGATGCTG GCCGCCATCG ACACTCTGGA GCAGTTGGTG
ACACGTGTGG CTGACGGGGA GGGATTGCCT GACACGGAAG CCCTTGCCAA CCGGATCCGC
AGCTATACTC CGGCTGCAAC GGATGGTGAG CCGGCTGTTG TGCGGAGCGC CGTCGTCCCC
TCTGCACTGG CAGCAGCAGA TGCTCCTCGC TTCCGCAGCA GTAGCGACAC CTCCACAACC
CGGATCAAAA CTTCGCTGCT GGACCGCCTG GTCACCATCT CAGGAGAACT GCTCACCGTA
CGCCACAGCC TTGAAAACCG GGCGACCTGC AATGATACCG CCGGGATGGC TCAACCGCTC
AAGGAACTGT CGTCGCTGCT GCGTCAGCTG CAAAACGAGG TATTTCAGGC CAGGATGCAG
CCGTTCGGAG CGATTGCCGA GCGCTACCCC CGTATGGTAC GGGATCTGGC ACGCAAGAGC
GGCAAAGAGA TCAGCTTCAG CATGTCAGGT GACAGCATTG AACTGGACCG CGGGGTGCTG
GAACAGATGA TTGAGCCGCT GATGCACCTG CTGAGAAATG CCGTTGACCA CGGGTTGGAG
CCCCCGGCGG AACGGATAAC CGCCGGTAAA GCGGCAACCG GCAATCTGCA GCTGGCTGTC
AGCCGCCAGG CTGATCAGAT CCTGCTGGAG ATCCGTGACG ACGGTCGGGG CATGGACCCG
GCGCGCATCC GTTCCAAAGC GGTCAGTCAG GGACTTCTCA CCAAACCACA GGCGGATGCC
CTGACCTTGC AGGAGACCCT GCTGCTGATC TGCACCCCCG GTTTCTCAAC TGCATCCGGA
ATCAGCGACA TTTCCGGACG TGGCGTAGGA ATGGATGTGG TGCAGAGCGC CATCCAGACC
ATTGGGGGCA CCCTGACGAT TGACTCCCTG CCGGGAAGCG GCACCACCAT CACCCTGCGC
CTGCCGGTCA GCGTGGCAAT CATCCACGCC CTGATGGTAC GCTGTGGCGA GCTGCAGTTG
GCAGTACCGG TCAGTGCCGT CACCAGCACC TGCGAGATAC GGCACCATGA GATCCTCCAA
AGAGGGCGCG AACTTTACCT GCTGCGCGAT GGCGCAGAAA TTCCGCTCCG CAACCTGCCC
CGTTTTTTCC GGCAGAAAGA GACCCTGCCT GACAATGGTC TGCTGCCGGT ATTACTGACC
GAATCAAACA AACAGCCGGT AGGGCTGCTG GTTGATCGCC TCCTGGGGCA GCAGGAGGTC
TTTGTCCGTC CCCTTCATCA TCCGCTGGCA GACCTGCGCG GCATCTCCGG CTCCTGCCTG
CTGGGCAGCG GCCAGATTGT CTTTATTGTT GATCCAAACG CCTGTACAGG CCCGGTCATC
GCTCAATAA
|
|---|
| Protein sequence | MDISRYRDLF VSEAREHLTA LGSLSVRCEK GETGSSIINE LFRHAHSLKG MAATMQLDPI
AILAHALEDL LDKVRSGSLT ITRSAADLML AAIDTLEQLV TRVADGEGLP DTEALANRIR
SYTPAATDGE PAVVRSAVVP SALAAADAPR FRSSSDTSTT RIKTSLLDRL VTISGELLTV
RHSLENRATC NDTAGMAQPL KELSSLLRQL QNEVFQARMQ PFGAIAERYP RMVRDLARKS
GKEISFSMSG DSIELDRGVL EQMIEPLMHL LRNAVDHGLE PPAERITAGK AATGNLQLAV
SRQADQILLE IRDDGRGMDP ARIRSKAVSQ GLLTKPQADA LTLQETLLLI CTPGFSTASG
ISDISGRGVG MDVVQSAIQT IGGTLTIDSL PGSGTTITLR LPVSVAIIHA LMVRCGELQL
AVPVSAVTST CEIRHHEILQ RGRELYLLRD GAEIPLRNLP RFFRQKETLP DNGLLPVLLT
ESNKQPVGLL VDRLLGQQEV FVRPLHHPLA DLRGISGSCL LGSGQIVFIV DPNACTGPVI
AQ
|
|---|
| |