Gene Glov_3169 details

Gene Information

• Locus tag: Glov_3169
• Symbol: atpC
• ID: 6366430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: -
• Start bp: 3389315
• End bp: 3389731
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642678586
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001953395
• Protein GI: 189426218
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00353797
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA AGATGAAGCT TGAAATAGTC ACACCCTACA GCAAGGTGCT TGATGAGTTG 
GTCGATGAAG TGACAGCGAC CGGAAAAATG GGTGAGTTCG GTGTACTGCC GGGTCATGCC 
CCTTTCCTGA CGTCACTCAA TATCGGTGAG CTTTGCTACA AGAAAGATGG CCAGGCTGTC 
AGCATGGCAC TCAACTGGGG CTACTTCGAG GTGCAGGACG ACAAGATCAT TGTCCTGGTT 
GAGACTGCCG AACGCTCCGA CGAGATCGAT CTCGAGCGTG CCAAAGCAGC GCTTGGCCGT 
GCCGAGGATG CGCTTAAGAA GTTGACTCCG GAAGACAAGC AGTTCAAGGT GTATGAAGCT 
GCTCTTGAAC GTGCCCTGAT CCGGATGCAG GTGGCCGGTA AGGCTGCCCG TAAGTAA 

 

Protein sequence

MAEKMKLEIV TPYSKVLDEL VDEVTATGKM GEFGVLPGHA PFLTSLNIGE LCYKKDGQAV 
SMALNWGYFE VQDDKIIVLV ETAERSDEID LERAKAALGR AEDALKKLTP EDKQFKVYEA 
ALERALIRMQ VAGKAARK