Gene Glov_3157 details

Gene Information

• Locus tag: Glov_3157
• ID: 6367915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: -
• Start bp: 3377616
• End bp: 3379598
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642678574
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_001953383
• Protein GI: 189426206

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.381068
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGGA TACTGTTGGT ACTTGGTATA GTGGTATTGC TTACCGGTTG TAACAATCCC 
GGCAAGGAGA GCTTTGAGCT TGGCCGACAA CTGGAACGTC AGGGGCGGGT TGATGAGGCC 
ATTACCCTGT ACGAAGATGC GATTGTCAAA GAACAGGATA ATCAGGAGTA CCGGGCAGTC 
CTGGCCAGTG CCCGCTCCGG TGCCGCCGCC CGTTTTGTTG AGCAGGGCCA CAAGCGGCTG 
CAAGGCGCCG AGATCACCTA TGATCAGCTG CGTACCGCTC AGCTGGATGT TGACAAGGCG 
CTTAAGGCTG ACCCCCACAA TAATGATGCA AAGGTGCTGG CGAGCAGTGT CAAGTCCCAG 
ATGGATGCCC TGCTGAAAAG AGCTGAAGCG TTATATGCTG CCTCAACCAA AGCTGCGGAT 
CTGAAGGACT GGCCAACGGC CATCAACAAG CTGCGGGAGA TCCGCCAGTT CTACCCCGGC 
TATCTGGATC TGATGATCAA GCTGCCCCAG ACAGAAAACG CCGCGCTTGG ATATTACCTG 
AAACAGGCTG AGCAGCTGCG GACTGCTGAT GACCTGGATG CGATGATTGT CAATCTGGAA 
CAGGCACTGG CGATTCAACC GGCTAATCAG CAAATTGCCG GATTGCTGAA GGATGCCAAG 
GTCAAAAATA CCGCCAGTGT CTGGTTTGGG AAGGCCGAGC AGAGCGCCAA GCAGGGGAAG 
TGGCTCCAGG TCGCAGGCTA TCTGGGTAAG GCGGAACTGC TGAGCCCGGA TCAGGTGCTG 
CAGACGAAAA TGACCGAATT GCGGCGTCAG GGTGCGCAAA AAATGTTACA GCAGGGGATG 
GTTCAGACCA GCAAGAAGCA GTTCTATACC GCCTACCTGT CGTTACAGGC AGGGCGGCAG 
TTCTCTCCTG CCTTCATGAA AGAGGCGGAG GCGGCGGACC TGCGTAAACA GCTTGCAGCA 
GATATGGCTG CAAAATCCCA GGAAATGGAA ACAACGGGCT TGCTGGGCAA TGCCTGGTAC 
TGGCTTGATC TGTCGATACG GCTGGGAGGT GGCGATCGTG AAAGCCAGCA GCGGTTACAG 
ACCCTCAAAG ACAGGCTGCG GCAACGGGTG GTTAAAAAAA TTGCGGTGAT GGATTTTTCG 
CCTCCAACGA ACAGTACTGA TGCCGGTAAG CTGGTAACCG ACAGTCTGCT TTCCTATATG 
ACCAAGAACG CTAGCAGCGA TGTCAAGATT CTGGCCAGGG ACGTGCTGGG GGCCATCATC 
AAGGAGATCG AGTTTGGTCA AGCCGGCCTC TATGACATCG AAAGCGCCAA AAAGACCGGT 
AAGTTAAAGG GAACGGACAT TTTTATCTTC GGTAGCGTAC TGCAGTACAA TGTGGAAAAA 
AGTGCTGAAG AAGGTTCCAA GATGGTCAAC GTGGTGGTGG CCACCAAGCA GGTTCCCAAT 
CCGGCCTACC AGAGCTGGCT TTTGAGCCAT CCGTCTCCCA ACGAGAAGGA GATGGCCCTG 
GCACCGCCGG CACTGATGAA GGAAGAGATC CGTGAGACAG TGAAATACAA GGTCGGTACC 
CACAAGAAAA CCGCCAACGT AGCACTCTCA TTCCGGGTGA TTGATGTGGA GTCAGGGGAG 
GTCGTGATTA CCACCACGAT CAAGAGCCGC AAAGAGGCGG AAGACAAGTT TTCTGAAGGG 
GTTGAGTTTG CCAATATCCC CTTTGATCCG ATGGAATTGC CTTCCGATGC CGTCCTGCTT 
GAGAAGGCGG TTGATGAGGG GATTGCCGAG TTGGGGCGCC TGGTGCTTAC GCGCTTCCAA 
AATCGTCAGG CCAGCTATCT GCAGGCAGCC GAGCTGCTGA GCAAAAAGGG GGGCGGCGAT 
CAGGTAGTCG AGCGGTACAT GGATGCCATT GTGGCTGAAG AGGTCAAGCA CGTCGCCAGC 
CAGGTAACAT CCCAGGCCAA ACTGGGTATT GAGCAGTATC TGCAGTCAGC TGAACAGCAA 
TAA 

 

Protein sequence

MKRILLVLGI VVLLTGCNNP GKESFELGRQ LERQGRVDEA ITLYEDAIVK EQDNQEYRAV 
LASARSGAAA RFVEQGHKRL QGAEITYDQL RTAQLDVDKA LKADPHNNDA KVLASSVKSQ 
MDALLKRAEA LYAASTKAAD LKDWPTAINK LREIRQFYPG YLDLMIKLPQ TENAALGYYL 
KQAEQLRTAD DLDAMIVNLE QALAIQPANQ QIAGLLKDAK VKNTASVWFG KAEQSAKQGK 
WLQVAGYLGK AELLSPDQVL QTKMTELRRQ GAQKMLQQGM VQTSKKQFYT AYLSLQAGRQ 
FSPAFMKEAE AADLRKQLAA DMAAKSQEME TTGLLGNAWY WLDLSIRLGG GDRESQQRLQ 
TLKDRLRQRV VKKIAVMDFS PPTNSTDAGK LVTDSLLSYM TKNASSDVKI LARDVLGAII 
KEIEFGQAGL YDIESAKKTG KLKGTDIFIF GSVLQYNVEK SAEEGSKMVN VVVATKQVPN 
PAYQSWLLSH PSPNEKEMAL APPALMKEEI RETVKYKVGT HKKTANVALS FRVIDVESGE 
VVITTTIKSR KEAEDKFSEG VEFANIPFDP MELPSDAVLL EKAVDEGIAE LGRLVLTRFQ 
NRQASYLQAA ELLSKKGGGD QVVERYMDAI VAEEVKHVAS QVTSQAKLGI EQYLQSAEQQ