Gene Glov_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_3115 
Symbol 
ID6367935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp3335396 
End bp3337483 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content50% 
IMG OID642678528 
ProductP4 family phage/plasmid primase 
Protein accessionYP_001953341 
Protein GI189426164 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID[TIGR01613] phage/plasmid primase, P4 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00327339 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATCTT TCTGGCTGGA TATTGACTGT GGCCCCGGCA AACCGTTTCC TGATCAGCAG 
GCAGGGGGGC GGGCTCTGCT GGAGTTTGCT AAAGCAACGA AACTGCCGAG TCCTACAGGG
GTGTCATCCG GTAATGGCCT GTATGCCTAT TGGGTACTGG ATACGGCAAT TTCAGCAGTC
GAGTGGCGAA CTACAGCTGC ACTACTGAAG AAGGCTTGCC AGGCTTATGA CTTTGAAGCT
GACCCATCAC GCACTTCTGA TGCAGCGTCT GTATTGCGGC CTGTAGGGGT ACACAATAGA
AAAGCCCCGG AAACTCCAAA GCCGGTTAAA GTCGGAATTA TAAGAGAGCG AATCAGCCCT
GAAGAGTTCA GGCTGTTGAT TGAAAAGGCA TTGCTGGCAA AGGGTGAACC ATTGCCTGCA
GTAAAGCTTG ATCAGGTCGC GGCAGATGAG TTCAGTATAA AGACCCCGGC TGACATTGCT
AACTTGAAAT CAGCTCTGCC TGCTATCTCC CCCGATGGCC GGGAAGAATG GATTTGTGTT
GGTATGGGGC TGCATCATGA GTTTGCAGGC AGTGAAGAGG GGCTTGCCCT GTGGGAAGAG
TGGAGCCGTG GCAGTACAAA GTTTAAAGAT GAAGAATGCC CAGAGAAGTG GGCAGGGTTT
GGGGACAGGG TCGATCAGCC TGTTACTGCC GGTACAATTT ACCACATGGC CAAAGCAGCT
GGCTGGCTAC CAGCTGAAAG AGTGTCAGAA GAAGCAGCGC TAAAGTTGCT TACTGACATG
CGGGTAAGCA GTTATTTTGC AGCAAAATTC AAAGATCGGC TCAGATTCAA TCCATCGCTT
GACTGGCTTG TTTTTGATGG TCAGCGTTGG AACAGTAATA CCCCCGGTGG AGCGTACCCT
TTTCTTAAAG AGCTGATTGC AGAGATCAGG GCAAAAGCCA GCCAGATAGA AAATGATGCT
GAACGGATGT CCATGTTGAA AGAGTCCGTT AAACTTGAGG CCCACAACCG ACAGGCCATG
GTTATCAGTG CCGCTCAAAA AATCCCGGAT TTCAGCGTAA GCAGCTGTCA GCTTGATCGT
GACCCCATGC TGCTTAATGT GTTAAACGGT ACGCTTGACT TACGAACCGG CTCCCTGAAG
CAGCATTCTC CTGCTGACTT TATCACGCGG CTTGTGCCGA TTGAATATAA CCATACCGCA
ACAGCGCCTG TATTTGAGGC GTTCTTAAGT AAGATCATGG CAGGTAACAC GGCATTGACT
GCATTTATCA AGCGGTGGGC TGGTTACTGC TTAACAGGTG ATACCTCAGA GCAGGTGCTG
TTGTTCCTTT ATGGCACCGG CAGGAACGGG AAAAGCACCT TTGTAAATAT ATTAAAAAAG
CTGCTGGGGG ACTTTGCAGC TACAGGAGCC GGTGACCTGA TTCTGCATAA AGGCAATGGC
GACTTGAGCA CCCTGTCTGC ACTTGCCGCA ATGCGTGGGG CACGCCTCGT TAATCTGAAT
GAACTAAACG ATGGCGACCG GTTGAATGAA GCAGCAGTGA AGAATCTGAC AGGTGGTGAC
CTTCTGGCCT GCAGATTTTT ACACAAGGAA TTTTTTGAAT ATAAACCAGC TTTTAAACTT
CTGCTGTTTG GTAACCACAA ACCAAGCATC CGGGGTACTG ACCACGGCAT ATGGAGACGG
CTCCACTTGC TGAAATTTGG CGTTACCATA TCAGACGCAG AGTGTGACCC ACACCTTGAG
CAGAAACTTG AAAAGGAGCT GCCGGGAATA CTTGCGTGGG CTGTTCAGGG ATGCCTTGAG
TGGCAGCGTG AAAAGCTGAG TCCGCCTGCT GAAGTGAAAG AGGCTGTGGC TGAATACAGG
AACTCTGAAG ATGCTCTAAA AGGCTGGCTG GATGATTGCT GTCAACTTGC CCCACAATTT
AGAACCCCGG CAGGGCTCTT GCTGAACTCC TTCATCCAGT ACAGCAACTG GAAGGGACTG
TCTGCTAGAC GCTTCAGCTC CATGCTGACT GTTGCTGGTT TTACCAAAGG GAGAAGTAAC
GGGGTGGTAT GGGAAGGTCT GGCACTGACG GTACCCCCGT TTAATTGA
 
Protein sequence
MQSFWLDIDC GPGKPFPDQQ AGGRALLEFA KATKLPSPTG VSSGNGLYAY WVLDTAISAV 
EWRTTAALLK KACQAYDFEA DPSRTSDAAS VLRPVGVHNR KAPETPKPVK VGIIRERISP
EEFRLLIEKA LLAKGEPLPA VKLDQVAADE FSIKTPADIA NLKSALPAIS PDGREEWICV
GMGLHHEFAG SEEGLALWEE WSRGSTKFKD EECPEKWAGF GDRVDQPVTA GTIYHMAKAA
GWLPAERVSE EAALKLLTDM RVSSYFAAKF KDRLRFNPSL DWLVFDGQRW NSNTPGGAYP
FLKELIAEIR AKASQIENDA ERMSMLKESV KLEAHNRQAM VISAAQKIPD FSVSSCQLDR
DPMLLNVLNG TLDLRTGSLK QHSPADFITR LVPIEYNHTA TAPVFEAFLS KIMAGNTALT
AFIKRWAGYC LTGDTSEQVL LFLYGTGRNG KSTFVNILKK LLGDFAATGA GDLILHKGNG
DLSTLSALAA MRGARLVNLN ELNDGDRLNE AAVKNLTGGD LLACRFLHKE FFEYKPAFKL
LLFGNHKPSI RGTDHGIWRR LHLLKFGVTI SDAECDPHLE QKLEKELPGI LAWAVQGCLE
WQREKLSPPA EVKEAVAEYR NSEDALKGWL DDCCQLAPQF RTPAGLLLNS FIQYSNWKGL
SARRFSSMLT VAGFTKGRSN GVVWEGLALT VPPFN