| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3079 |
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| Symbol | |
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| ID | 6366072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3298782 |
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| End bp | 3301919 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642678491 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001953305 |
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| Protein GI | 189426128 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.931576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAA AAATCATCGA ATACAGTGCC AGAAATCGGG TTGTTGTGCT GATGCTGTTC
GGCCTGATCA CCGCCTGGGG CCTCTGGGCG GTCTACAAGA CCCCGGTGGA TGCCATCCCG
GACCTCTCGG ATAACCAGGT GATCGTCTTC ACCGATTATC CCGGCCGTTC ACCCCAGGTG
GTTGAGGACC AGGTCACCTA TCCCCTGGCC ACCAACCTGC AGGGACTGCC CCAGGTACGG
GCGGTACGGG CCTCATCCGC CTTCGGCTTC TCCATGATCT ATGTGATCTT TGAGGACAAG
ACCGACATCT ACTGGGCCCG CACCAGGGTG CTGGAACGGC TGAACTACGC GGCCTCGCTG
CTGCCGGCCG GTGTGGTGCC GACCCTGGGG CCGGACGGCA CCGGCGTGGG GCATGTCTTC
TGGTACACCA TTGAGGGCAA GGGCTACGAT CTGGAGCAGC TGCGCACCCT GCAGGACTGG
TTTGTGCGTT ACCAGCTCAA CACCGTGCCG GGGGTGGCCG AGGTAGCCTC CATCGGCGGG
CTGGTGCGGG AATACCAGAT CGACCTGGAC CCGACCAAAC TGCAGGCCTA CAGCATCTCC
AGCGCCAAGG TGATGGAGGC GCTCAAAGGC TCCAACAAGG ATGTGGGGGG ACGGCTGATC
GAGCAGGCCG ATGCCGAGTA CCTGATCCGT GGCCAGGGCT ATGTCAAATC GCTGGCCGAT
CTGGAGAATG TCGTGGTGGG TGTGGATATG CGCGGCACCC CGATCTATGT CAAGAACCTG
GGTACGGTGC AGCTGGGCGG CGCCATCCGG CGGGGCATGC TGGATCTGAA CGGCCAGGGC
GAAGCGGTGG GCGGCATTGT AGTGATGCGC TACGGCGAGA ACGCCAAGGA TGTGATCGAC
CGCGTCAAGG AGAAGATCGA GGCCCTCAAG AAGGGCCTGC CCCCCGGCGT AACCATCCAG
GTGGCCTATG ACCGCTCCGA CCTGATCGAA CGGGCCATCA CCACCCTCAA GCATGCCCTG
ACCGAGGAAT CGATCGTGGT GTCGCTGGTG ATCCTGGCCT TCCTGCTGCA TTTCCAGAGC
TCATTGGTGA TCGTGCTGAC CCTGCCGATT GCGGTGTTGA TCTCCTTCAT CACCATGAAG
CTGATGGGGG TCACCTCCAA CATCATGTCC CTGGGCGGGA TCGCCATTGC CATCGGCGTG
CTGGTGGATG CCGGGGTGAT CATGGTGGAG AACTGCTACC GCCGCCTGTC CGAGCTGTCC
GAAGAGGAGC GCAAGGCGCA GCGCCTGGAG GTGGTTATTG CCAGCGCCAA ACAGGTGGGC
CGGGCGATCT TCTTCTCCCT GGCGATCATC GTGCTCTCCT TTGTGCCGGT CTTCCTGCTG
GAGGGTCAGG AGGGCAAGCT GTTCCATCCG CTGGCCTTTA CCAAGACCTT CTCCATGATC
GGCTCGGCCT TTATCGCCAT CACCCTGGTG CCGGTGCTGA TGTACTACTT CATGCGGGGC
AAGATGCCGC GGGAGGAGTC CAACCCGGTT TCCACCTTCT TTATCCGGCT CTATTCGCCG
GTGATCCGCT GGGTACTGGT CTGGAAAAAG ACCACCATCG CCCTCAACAT CGTTGCGCTG
CTGGTGGCGG TGCCGCTCTT CATGCGGCTG GGCAGCGAAT TCATGCCGCC CCTGGACGAG
GGTTCGCTGC TCTACATGCC GGTGACCCTG CCCAACGTCT CGATCACCGA GGCCAAGCGG
ATCATCCAGG TGCAGGACAG CATCATCAAG GGTGTGCCTG AGGTGGAATC GGTGCTGGGC
AAGGTGGGAC GGGCCGAGAC CTCCACCGAC CCGGCCCCGG TCTCGATGTT CGAGTCGATC
ATCATCCTGA AGCCCAAGCA GCAGTGGCGC CCCGGCATCA AAAAGGCCGA TATCGTGGCC
GAGCTGGACA GCAGGCTGCA GCAGGTGGGG GTCCGTAACG GCTGGACCCA GCCGATCATC
AACCGGATCA ACATGCTCTC CACCGGGGTG CGGACCGACC TGGGGGTCAA GATTTTCGGA
TCAGACCTGA ATGTGCTGCG TGACCTGGCG ATCCAGGCCG AGGGGATCCT CAAGCCGGTC
AAGGGGGCAG CCGACGTGGT GGCTGAGCGG GTCACCGGCG GCAACTACCT GGATATCGAG
ATCGACCGTG AGGCCGCTGC CCGTTACGGG GTCGGGGTGG AAGAGATCCA GAACGTGATC
AGCACCGCCC TGGGGGGTGA GATGCTGACC ACCACCGTGG AAGGGCGTAA CCGCTTCCCG
GTCCGTCTGC GCTACCTGCG GGACTACCGT GACAACATCC CGGCCATCCG CCGCATCCTG
GTGGCCGGCA TGGGAGGCAG TCAGGTACCG CTCTCGCTGG TGACCAGGCT GAAGGTCTCC
ACCGGTGCAC CGGAGATCAA CAGCGAAGGC GGCCTGCTGC GCTCGATCGT CTTCCTGAAC
GTGCGGGGCC GCGACATGGG CGGGTTTGTC AACGAGGCCA AGCAGGTGCT GGAGAAACAG
CTCAAGCTGC CCCCCGGCTA CTACGTGGCC TGGTCCGGCC AGTGGGAAAA CCAGGTGCGG
GCCAAGGCGA GGCTGCAACT GCTGGTGCCG CTGGGGATGG TGATCATCTT CATCCTGCTC
TACTTCACCT TCCACTCGGC CCTGGAGGCC AGCATGGTGA TGCTCTCGGT GCCGTTCGCC
CTGGTGGGCG GGGTCTATCT GGTGGCAGCC CTGGGGTACA ACATGTCGGT GGCGGTCTGG
GTCGGCTTCA TCGCCCTCTA CGGCATTGCC GTGGAGACCG GGGTGGTGAT GGTGATCTAC
CTGCACGAGG CCCTGGACAA GCGTCTGGCC AAGGGTCCGG TCACGGAACA GGATATCTAT
GATGCCACCT TTGAAGGAGC CGTGCTGCGG CTGCGGCCCA AGCTGATGAC CGTAGCGGTG
GCCCTGCTCG GCCTGGTGCC GATCATGTGG TCCAGCGGTA CCGGCGCTGA CGTGATGAAG
CCGATCGCCG CGCCGATGAT CGGCGGCATG ATCTCATCGG CAGTACACGT GCTGATCATG
ACCCCGGTAA TCTTTGTACT GATGAAAAAG CGAGAACTGA AAAAGGGTGC GTTGCACTAC
AGCGGCATGA AGCACTGA
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| Protein sequence | MIEKIIEYSA RNRVVVLMLF GLITAWGLWA VYKTPVDAIP DLSDNQVIVF TDYPGRSPQV
VEDQVTYPLA TNLQGLPQVR AVRASSAFGF SMIYVIFEDK TDIYWARTRV LERLNYAASL
LPAGVVPTLG PDGTGVGHVF WYTIEGKGYD LEQLRTLQDW FVRYQLNTVP GVAEVASIGG
LVREYQIDLD PTKLQAYSIS SAKVMEALKG SNKDVGGRLI EQADAEYLIR GQGYVKSLAD
LENVVVGVDM RGTPIYVKNL GTVQLGGAIR RGMLDLNGQG EAVGGIVVMR YGENAKDVID
RVKEKIEALK KGLPPGVTIQ VAYDRSDLIE RAITTLKHAL TEESIVVSLV ILAFLLHFQS
SLVIVLTLPI AVLISFITMK LMGVTSNIMS LGGIAIAIGV LVDAGVIMVE NCYRRLSELS
EEERKAQRLE VVIASAKQVG RAIFFSLAII VLSFVPVFLL EGQEGKLFHP LAFTKTFSMI
GSAFIAITLV PVLMYYFMRG KMPREESNPV STFFIRLYSP VIRWVLVWKK TTIALNIVAL
LVAVPLFMRL GSEFMPPLDE GSLLYMPVTL PNVSITEAKR IIQVQDSIIK GVPEVESVLG
KVGRAETSTD PAPVSMFESI IILKPKQQWR PGIKKADIVA ELDSRLQQVG VRNGWTQPII
NRINMLSTGV RTDLGVKIFG SDLNVLRDLA IQAEGILKPV KGAADVVAER VTGGNYLDIE
IDREAAARYG VGVEEIQNVI STALGGEMLT TTVEGRNRFP VRLRYLRDYR DNIPAIRRIL
VAGMGGSQVP LSLVTRLKVS TGAPEINSEG GLLRSIVFLN VRGRDMGGFV NEAKQVLEKQ
LKLPPGYYVA WSGQWENQVR AKARLQLLVP LGMVIIFILL YFTFHSALEA SMVMLSVPFA
LVGGVYLVAA LGYNMSVAVW VGFIALYGIA VETGVVMVIY LHEALDKRLA KGPVTEQDIY
DATFEGAVLR LRPKLMTVAV ALLGLVPIMW SSGTGADVMK PIAAPMIGGM ISSAVHVLIM
TPVIFVLMKK RELKKGALHY SGMKH
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