| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3078 |
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| Symbol | |
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| ID | 6367974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3297253 |
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| End bp | 3298635 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642678490 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001953304 |
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| Protein GI | 189426127 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA ACAAGAAGAT CTATATACCG CTGACCATCC TGACTCTTGC AGTTGTGTTC
GTCAGTTGGC TCTACAAGTC AGGCAAGCTT ACCAAGGAGG CGGGCTGGTC CAAGAAGGAG
ACGCTCAACC ATCAGGAGCA GACCACCGGA CCGCTATATA CCTGCCCGAT GCACCCCTTT
ATCATCCAGG ACAAGCCGGG CAGCTGCCCG ATCTGCGGCA TGGAGCTGGT CAAGAAGCTG
AGTGATGCCC AGAACGCCGT GCAGACCGCG GAACAGCGGC AACAGGCCGA AAAACTGGGC
CATATCGCCC TGTCCACCAC CCAGCGGGTG ATGGCCAATG TGGCGACCCA GGCAGCTGCC
GTCCAGACCA TCAGCAAAGA GATCTCAGCT GTTGGCGTGG TGCAGTACGA CCAGTCCCGC
CAGGCCAAGG TAACCGCCTG GATTGCCGGA CGGATCGACC GGCTGCATGT GGATACGGTG
GGGGCCTATG TCGCCAGGAA CAGGCCGGTG GCAGAGGTCT ATTCGCCTGA ACTGCTGGCT
TCGCAGCAGG AATACCTGCT GGCGGTCAAG AGCCGTGAGC AGCTCAAGAA CTCGCCGATC
CCCTCGATTG CCCAGAACGG CGAGGGACTG GTGGCCTCGG CCCGTCAGCG CCTGATGCTG
TACGGGGTAA AAGAGAGCCA GATCGCCGAG CTGGAACGGG CAGGCAAACC GAACATCCGC
CTGCCGATCT ACACCCCGCT CTCCGGGGTG GTGACCGAGA AGCTGGTGCA ACAGGGACAG
TACGTGAATG TGGGAGATGC CCTGTTCAAT ATCGCCGATC TTTCCCGGGT CTGGATCGAG
GTTGAGGTCT ACGAGAGCGA GTTCCAGAAC ATCAGGATCG GCCAGACCGT GGAGATCGCC
TCCCAGTCCT TTCCGGGCAA GCGCTTCAGC GGCCACGTTG CCTTTATCTA CCCCTTCCTT
GACCCCAAGA CCCGCACGGT CAGGGCCCGG GTAGAGATGC CCAACCCAGG CCTGCGGCTC
AAGCCGGACA TGTTTGTGAA CGCCGTCATC AAGGTGGGCT TGAGCCCGGC CATTGTGGTG
CCGGTCAGTG CGGTGATGGA TTCCGGCAAG CGCCAGGTGG TCTGGATAGA GACACAAGCG
GGTGTGTTTG AGCCGCGTGA GGTCAAGGTG GGGCAGCGCA GCGACGACCG GATCCAGATC
CTGTCCGGCA TCAAGGCGGG TGACAAGGTG GCGGTCTCCG GTGCCTACCT GATCGATTCG
GAATCGCAAC TGCGGGGCGG CGTGCCGCAG GACCACAGCC AGCACGGTGC TGGCGGTCAG
ACCGCACCGG CAGCGGCCAA GAAGAGTGAT GGGCTGGATA TGGATGACAT GAAGATGAAA
TAG
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| Protein sequence | MKLNKKIYIP LTILTLAVVF VSWLYKSGKL TKEAGWSKKE TLNHQEQTTG PLYTCPMHPF
IIQDKPGSCP ICGMELVKKL SDAQNAVQTA EQRQQAEKLG HIALSTTQRV MANVATQAAA
VQTISKEISA VGVVQYDQSR QAKVTAWIAG RIDRLHVDTV GAYVARNRPV AEVYSPELLA
SQQEYLLAVK SREQLKNSPI PSIAQNGEGL VASARQRLML YGVKESQIAE LERAGKPNIR
LPIYTPLSGV VTEKLVQQGQ YVNVGDALFN IADLSRVWIE VEVYESEFQN IRIGQTVEIA
SQSFPGKRFS GHVAFIYPFL DPKTRTVRAR VEMPNPGLRL KPDMFVNAVI KVGLSPAIVV
PVSAVMDSGK RQVVWIETQA GVFEPREVKV GQRSDDRIQI LSGIKAGDKV AVSGAYLIDS
ESQLRGGVPQ DHSQHGAGGQ TAPAAAKKSD GLDMDDMKMK
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