| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2936 |
|---|
| Symbol | |
|---|
| ID | 6369029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3150903 |
|---|
| End bp | 3151634 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642678349 |
|---|
| Product | competence protein F, putative |
|---|
| Protein accession | YP_001953163 |
|---|
| Protein GI | 189425986 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0346269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACT TTCTCCGCAC GCTCGCAACC GCCCTGCAGG ATCTGCTGCT GCCACCGCGC
TGCCATATCT GCCACAAACC GGTCCCCGAT GCGGGCAGAC TGCATATCTG CCCGGACTGC
CGGGTGGGCC TGCCACTCGC AGGCTCACCG GTCTGCTCTA TCTGCGGCAT CCCCTTTCAG
TCTGCCGGGG ATGATCACCC CTGCAGCCGT TGTATCGCTG CACCGCCACC CTATACGGCA
GCCAGGGCCG CATTGCGCTA TGAAGGTGCC TGCCGCGACC TGATTCACCA CTTCAAATAC
AATGGCAAAT CATACCTGCG ATGCCCTCTG GGACTTATAA CGGCAGAACT GCTGGCCCCG
TTTGTAGCCG CCCAGCAACC AGACCTGCTG GTGCCGGTGC CGCTACACCC CAGCCGTCTG
CGAAGTCGCG GCTTTAACCA GGCGGTGCTG TTGGGGGATC TGCTCTCCCG CCAATGGCAG
ATTCCGCTGC TGCGACAGGG TCTAAAGCGG ACCCGCCCCA CGCCCCCCCA GATAGAGCTG
AGCCGTGAAC AACGCTCCAC CAACCTGCGG GGAGCCTTTG CCGTCACGAC CCCGGACAGT
GTCAACAATC GCCATGTCAT GCTGGTGGAT GACGTCTTTA CCACCGGCAG CACCCTGGCA
GAATGCGCTC TGGTGCTGCA GCGGGCAGGC TGCCACACCG TATCGGCGGT TACCGTTGCC
CACGCACCCT GA
|
|---|
| Protein sequence | MQHFLRTLAT ALQDLLLPPR CHICHKPVPD AGRLHICPDC RVGLPLAGSP VCSICGIPFQ
SAGDDHPCSR CIAAPPPYTA ARAALRYEGA CRDLIHHFKY NGKSYLRCPL GLITAELLAP
FVAAQQPDLL VPVPLHPSRL RSRGFNQAVL LGDLLSRQWQ IPLLRQGLKR TRPTPPQIEL
SREQRSTNLR GAFAVTTPDS VNNRHVMLVD DVFTTGSTLA ECALVLQRAG CHTVSAVTVA
HAP
|
|---|
| |