| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2870 |
|---|
| Symbol | |
|---|
| ID | 6369093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3077378 |
|---|
| End bp | 3078922 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642678287 |
|---|
| Product | reductive dehalogenase |
|---|
| Protein accession | YP_001953101 |
|---|
| Protein GI | 189425924 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR02486] reductive dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0453791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTA GAGATTTTTT TAAAAAGGCA GCTCTCACAT CAGTTGTAGC AGGTGCAGCA
GTTATATCGT CACCTCTAAA ATCATCGGCA CGATTGGTGT TAAGTAAGGA GCAAGATGAA
TTTCCGTATG AAATCTCGTC TGATTTCAAA GGGATGCCTC AGACTAATTG TATTTTCTGT
CGTGTTTTTA GCGATAAGGA TGCAGTTGTA GATGAGTATG TGCAGAAAAC GTATGGGCTC
ACAAAAATTG ATCAGATGGG GGCAATGTTG GCGTCATCAA AAGATGGATT TGTTCACCCT
GAACAGCATG GAGAGCCTGG TTTTACAGCT GTTGATAAAG CATTAGAGTT AGCAGGATGG
GCAACAAATG ATGAATTTTC CCCATATGCA GAATTCGGCA GGAGGAATTC TTTAATTGGA
ACACACATCG TAAATCCAGT GACTGGAAAG ATTGCTAAGG ATAAGCCTGT GTTTGTCCCA
GGCCTTCATA CATGGGATAA TTCACGCGCT GAATATGAAA TAAAACACGG TGATGGTCGT
TATCAATTTA AAGATAAGCA AGAAGCTACT GACCGTATTA AGAGGGCTTG CCGTTATTTG
GGTGCAGATT TGGTTGGTGT CACGTCTTTT GAGCGGGCTC AAAAGTGGGT GTACACAAAT
TGGCTAGATC TGCATCCAAT AAAAAATACA TTTCCAGATG GTACCGTAAA AATGATGACG
TACGATGCTA TGGAGGCGCA AAAGGGCAAT TTTATATCTG CAGGATATGG TGTCTCTCCG
CCTGATTTTA GAGCTGAGTC AGGGTTTGAG CCTAAATCTG TTATCACGTT GGCATGGGCG
ATGGACTATG ATGCAATGAA AACAGCTCCA TCGTTAGTTG CTGGTGCTGC TGCAGGTGAG
GGTTACTCTA GATTGGCTGA GATAAGTTAT AAGGTGTCAA CATTCTTGAG ACGCTTGGGT
ATAAAATGTG CGCCATGTGG AAACGACACT GCAGCTTCTA TTCCCATTGC AATTGAATCT
GGAATGGGTG AAGGCAGTCG TATGGGGATG TTGATTACCG AAAAATATGG GCCCAGAGTA
CGTCTTGCAA AAATATTTAC TGATATAGAG TTAGTCCCCG ATAAGCCTAG AACGTTCGGT
GTTAAAGATT TTTGTAAAAA TTGTATGAAA TGTGCTGATG CTTGTCCTGC AAAGGCTATT
AGTAAGGATC CTGCCCAAGT GTATAAAGTT GGCCAAGAAA CTAGTGTTGG GAAGATTAAT
AAGTCACATC TTGCGGGAGT TGAACACTAC TATGTAAATG CTGAACGGTG TTTTGGTTAT
TGGGTTGCTA CTGGTACTAC ATGTGGCACA TGTGTGGCTG TGTGTCCGTA TAATAAGATT
GATGAATGGC ATCATGATCT AACTAAAATA GCGACTTTAA CACCATTTAA ACCGCTGTTG
CGTCATCTTG ATGAATTGTT TGGATATGGT GGGCCACTTG ATAAGACGAG ACCAAAGTCA
AAATGGTTTA AGGATGCGGT TGCGGACTTC TGGAACAAGG CATAG
|
|---|
| Protein sequence | MDRRDFFKKA ALTSVVAGAA VISSPLKSSA RLVLSKEQDE FPYEISSDFK GMPQTNCIFC
RVFSDKDAVV DEYVQKTYGL TKIDQMGAML ASSKDGFVHP EQHGEPGFTA VDKALELAGW
ATNDEFSPYA EFGRRNSLIG THIVNPVTGK IAKDKPVFVP GLHTWDNSRA EYEIKHGDGR
YQFKDKQEAT DRIKRACRYL GADLVGVTSF ERAQKWVYTN WLDLHPIKNT FPDGTVKMMT
YDAMEAQKGN FISAGYGVSP PDFRAESGFE PKSVITLAWA MDYDAMKTAP SLVAGAAAGE
GYSRLAEISY KVSTFLRRLG IKCAPCGNDT AASIPIAIES GMGEGSRMGM LITEKYGPRV
RLAKIFTDIE LVPDKPRTFG VKDFCKNCMK CADACPAKAI SKDPAQVYKV GQETSVGKIN
KSHLAGVEHY YVNAERCFGY WVATGTTCGT CVAVCPYNKI DEWHHDLTKI ATLTPFKPLL
RHLDELFGYG GPLDKTRPKS KWFKDAVADF WNKA
|
|---|
| |