| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2812 |
|---|
| Symbol | |
|---|
| ID | 6367653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3023619 |
|---|
| End bp | 3025019 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642678229 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_001953045 |
|---|
| Protein GI | 189425868 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTGA AAAGCTCGTT CAGGGTGCTG GATGGTGATC GTAAAACCCG TGATCTTGTG
TCAGCTTTTC TGACATATAA AGGCTACGAG ACCGTTATTC TCGATGATAA TGCAGATCTT
TTTGACACGG ACCGGACAAC GTCGCCACGG ATACTGGTTG CTGATCTGGT ATCTCTGTTT
GCCAGGTCCG GTGATGCACT GCAGCAGATT TGGCAGACTG ACCCCGAACA GGTAGCGATC
GTTTATGCCC AATCTGACGC TGCCCGTACG CTGCCCCATG ATGAACGGCT GATATTTCTG
CCTAAACCGC TTAACCTTGA TGAGCTTGAA AGCGTGGTGA TGCGGGCACT GGAGTACCAG
GCCCTGAAAG TGCGGATGCC GGAGCAGCCG GTTGATGAAT ACCCTCATTT TCTTTGCTCC
ACCATCATTG GCAGAAGCCG CCAGATGCTT AATCTGTTTG AGATGATTGA GAAGGTCGCG
GAATCCAGCG CGACGGTCCT GATTCAGGGA GAGTCCGGAA CCGGCAAGGA ACTTGCAGCT
CGGGCAATAC ACCAGCTTTC AAGCCGGAGC AGCAAAAATT TTGTGCCGGT TAACTGTGCA
GCCATTCCGG ATGACCTGCT GGAGAGTGAG CTGTTCGGGC ATGTGAAAGG GTCATTCACC
GGTGCCTATG CCAATCGGAT CGGCCGGTTT GAGATGGCTG ACAAAGGAAC CCTCTTTCTG
GATGAAATCG GTGATATGAA GGCGACCCTG CAGGTCAAAC TGCTGCGGGT GCTGCAGGCC
AAGGAGTTTG AACCGGTTGG ATCAACCCGT TCCCAGAAGG TGGATGTCCG GATTATTGCC
GCATCCAATA AGAATCTGGA TGAACAGGTG GCGACCCGTG ATTTCAGGGA GGATCTCTAC
TACCGGCTTT CGGTAATTCC GATTACGATT CCTCCCCTGC GAGACCGGCG TGAAGACATT
CCGCTGCTGA TCAATCACTT TCAGGGACAG TTTAACCGTG ATCGTCGGCG TCTGGTCAAA
GGCTTTACCC GCGAGGCGCT TGAGATGCTC TGTAACTACG ATTGGCCGGG CAATGTGCGG
GAGCTTGAAA ACCTGGTGGA GCGGATGATC ACTATGAAGG AGAGCGGGTT TATCACGGTG
GATGATCTGC CGGAAAAATA CCTGGCCCCC CGTACGGTTG TAGCGCCGCC GCTGTCAGTT
TCCGGTTCTG TCCCTGTCGG CAAGGAGCTG CCGCCGGAAG GAATCTGTCT GAACAGTGCC
GTTGACGCCT TCGAGAACGG CCTGATCATG CAGGCCCTGC ACCGTACCGG CGGTAACAAG
AAAGAGGCCG CAGCCCTTCT GAACCTGAAA CGGACAACCC TGATTGAGAA GCTTAAGAAG
AAAAACCTGC AGTTCCCCTG A
|
|---|
| Protein sequence | MTVKSSFRVL DGDRKTRDLV SAFLTYKGYE TVILDDNADL FDTDRTTSPR ILVADLVSLF
ARSGDALQQI WQTDPEQVAI VYAQSDAART LPHDERLIFL PKPLNLDELE SVVMRALEYQ
ALKVRMPEQP VDEYPHFLCS TIIGRSRQML NLFEMIEKVA ESSATVLIQG ESGTGKELAA
RAIHQLSSRS SKNFVPVNCA AIPDDLLESE LFGHVKGSFT GAYANRIGRF EMADKGTLFL
DEIGDMKATL QVKLLRVLQA KEFEPVGSTR SQKVDVRIIA ASNKNLDEQV ATRDFREDLY
YRLSVIPITI PPLRDRREDI PLLINHFQGQ FNRDRRRLVK GFTREALEML CNYDWPGNVR
ELENLVERMI TMKESGFITV DDLPEKYLAP RTVVAPPLSV SGSVPVGKEL PPEGICLNSA
VDAFENGLIM QALHRTGGNK KEAAALLNLK RTTLIEKLKK KNLQFP
|
|---|
| |