Gene Glov_2785 details

Gene Information

• Locus tag: Glov_2785
• ID: 6366902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: -
• Start bp: 2992548
• End bp: 2994494
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642678201
• Product: diguanylate cyclase with PAS/PAC sensor
• Protein accession: YP_001953018
• Protein GI: 189425841
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2202] FOG: PAS/PAC domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCAAA AGAAAATCCA TAACCTCAAA CTGATTTACG GTATTGCATT GACATTTATC 
GGCTTGACCA TCTTTTTGTC GGCCTTGCTC ATGGGTAGCG CCATTAAGAA CCATGAAGAT 
GTTGCAAGGG TAATAAACCT CTCCGGACGT CAGCGCATGC TGAGTCAGCG CATCACAAAA 
GGAGTGCTTG CCCTTGCCTA CACAAAAGAC CCAAAGGAGC AGAAACATCA GCTAGAGGTC 
CTGTCGAAAT CATTATATGA CTTAAAGGCT GTTCACCTTG GACTGCAGCA TGGCGACCCC 
AAGCTGGGTC TGCCAAGCCG TGATAATACG CTGCAGGTAA AGGAACTGTT TGTTGCCGTT 
GAACCGTATC ATGCGAAGAT AGTCCAGGCA CTGGCAACGC TACTTGAAAA GAGCAAGCGG 
GAAACGCTTG ATCATGGTTT GTTGCAACGT ACAGTTGATG TCATGTTTGC TAATGAGCCT 
GCTTTTCTGT CGATCATGGA AAAAATCACC TTCCGCTTTG ATGAGGATGC CAAAAGACGG 
ATCAAGCTCC TGTCTCATCT GCAAAACAGT ATCCTCGCTG TCGACCTGCT GATACTTTTT 
CTGGTTTTTT TATTCATATT CCGGCCAACC TTGAAAAATT TAGAAATCTC TGTGGGGCTC 
CTCAGAGACA GTGAAGAACG TTTACGCGCT ATTACCGATA CGGCCGGTGA TGCCATCATG 
ATAATGGACC CTCAGGGGGC TATTTCCTAC TGGAACCCGG CCGCTGAACA GATGCTGGGC 
TATCGTTCCG AAGAGGTTAT GGGAAAAAAC CTCCATGAGT TGCTGGTACC CCAACGTTAC 
CATGCAGAGT ACCAAGCAGC GCTGCCCAAT TTTTTCCATA CGGGAAGTGG TGATGCAGTT 
GGAAAGATTC GCAGTCTTTT TGCCATACGG AAGGATGGTC AAGAGATTGC TGTATCACAC 
TCTCTGTCGG CATTCCTGCT TAATGGTGAG TGGCATTCCG TTGGGATACT CCGTGATATT 
ACCGAAAGTT TACAACAGCA GGAGTCGTTG AAAAACAGCG AAGAAAATGT GCGTCTCCTG 
CTCAACTCGG CTGCTGAAGC CATTTGCGGC ATTGACTTGG ATGGCAACAG CACCTTTGCC 
AATCCATCCT TTCTCAAAAT GCTGGGTTAC ACAGACCTGG TGCAGGTCAT TGGGAAAAAT 
GTGCATCAGC TCACGCATCA CTCGTATCCT GACGGGACTC CGTTTCCGGT TGAAAACTGT 
TGTCTTCATC GCGCAATTCA TGACGGTCTT CAGATCCATC TGGACAGTGA AACATTGTGG 
CGCTCTGACG GTTCCTGCTT CCCGGTCGAG ATATGGGCAC ATCCTCAGAT AACAAATAAT 
AGGCTTGTCG GGGCGGTCAT TACGTTTGTC GACATCACCG AACGCAGGAA GATGGAAGCA 
ACGCTGCAGC AAATGGCCCA TTACGATATT TTAACGGGGC TACCCAACCG CGCCCTGTTC 
AGCGACCGTG TTCAACAGGC ACTTGTCGAG GCAAAACGTG ATCGAAAATG CTTAGCCATT 
ATGTTTATCG ACCTGGATAA ATTCAAGCCG GTGAACGACA ATTATGGTCA TGCCGTTGGC 
GATCTGTTGC TGAAGGAAGT GGCAAACCGA ATTAAACTGC CTATTCGGGA GTCTGACACT 
GTGGCGCGCA TTGGTGGTGA TGAGTTTGTG GTGCTCTTAA AGAATATTAA AGATGGGCAA 
GATGCTTTGG TGGTTGCTGA AAAAATACGT ACTTCACTGA ACATGCCGTT TATACTTAAT 
ACTCTTTCCC TTGGCATCTC TTCAAGTATC GGTATTTCGG TCTTTCCTGA GCATGGCCCT 
GACGAGGTTA CATTGTGTAA AAATGCCGAT ACTGCAATGT ACCAGGCAAA AGTAAGTGGG 
CGGGATGCTG TGCGGTTATT TGCATAA 

 

Protein sequence

MDQKKIHNLK LIYGIALTFI GLTIFLSALL MGSAIKNHED VARVINLSGR QRMLSQRITK 
GVLALAYTKD PKEQKHQLEV LSKSLYDLKA VHLGLQHGDP KLGLPSRDNT LQVKELFVAV 
EPYHAKIVQA LATLLEKSKR ETLDHGLLQR TVDVMFANEP AFLSIMEKIT FRFDEDAKRR 
IKLLSHLQNS ILAVDLLILF LVFLFIFRPT LKNLEISVGL LRDSEERLRA ITDTAGDAIM 
IMDPQGAISY WNPAAEQMLG YRSEEVMGKN LHELLVPQRY HAEYQAALPN FFHTGSGDAV 
GKIRSLFAIR KDGQEIAVSH SLSAFLLNGE WHSVGILRDI TESLQQQESL KNSEENVRLL 
LNSAAEAICG IDLDGNSTFA NPSFLKMLGY TDLVQVIGKN VHQLTHHSYP DGTPFPVENC 
CLHRAIHDGL QIHLDSETLW RSDGSCFPVE IWAHPQITNN RLVGAVITFV DITERRKMEA 
TLQQMAHYDI LTGLPNRALF SDRVQQALVE AKRDRKCLAI MFIDLDKFKP VNDNYGHAVG 
DLLLKEVANR IKLPIRESDT VARIGGDEFV VLLKNIKDGQ DALVVAEKIR TSLNMPFILN 
TLSLGISSSI GISVFPEHGP DEVTLCKNAD TAMYQAKVSG RDAVRLFA