| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2775 |
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| Symbol | |
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| ID | 6368675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2980051 |
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| End bp | 2982852 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642678191 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001953008 |
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| Protein GI | 189425831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.687385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTC TGCACCCTTC ATTACGGGCC AGAATGACCC TGGCAGTGAC CGGCCTGATC
CTGGTCCTGA TGCTGGTAAC GGCCATAGTC ACGCTGACTT TTTTTGAGCG GGAATATGAG
CGGAACATGA CTGCGCAACA GTCTGATGTC GTTCGTTACC TTGCCGGAGA TGTTGATGCC
ACATTAAGCA ACATTCTGGA GGCGTTGTTC GTCAATGCTC GGTCGGTACC GGACAGCGCC
TTGACCAACC CCCATGCGGC GCAAGAGTAC CTTGCAAGCC GCACCGGACT GCAACGTTTT
TTCAAGAATC ACCTGCACCT GTATGGAGCG AACGGCCGCT TGATCGGCAC GTCAGCTCAG
CATCATCACG CCACCTCGGA ATCAATTGCC GGCCAGCAGT ACTTCAAACA GACCATGCAG
CAGGCCAAAC CGCTGATCAG TGATCCAACA AGCCATGGAC ACACTGAAAA CCAGGCTAAT
ATCGTCTTCA CCGCACCTGT TATACGCGGA AACGGACAGG TTGTTGCCGT CTTGACCGGC
AGCTTCAACC TGTACGAAAA GAACCCGCTT TCCCGTTATG TTTCGATAAC TTTGGGGAAA
AGCGGTATTT TGCGTATTAT TTCAAACAGC GGCCAGGTTC TGCTCCACGC ACGAAACAGC
CGGATTCTTC AGAATGCCTC TCAAGGAGCC GGCCCGCTTG TTGAAAAGGC ATTACGGGAA
GGCACGGCAA CCGGTCGCCA CATCGGCATG GACAATCAGG TTCTGATCGC CTCCATGCAG
CGCCTGAACA CAGTCAACTG GGTGCTGGCT GCCAGTTATC CGGAGACGGA CGCCTACGCT
CCGGTCCGCA CCGCACGGAC CTGGTTCATT ATTGCCACCC TGCTCGGCAT GGCAGTGGCA
GTACTGCTCG TACTGTTCAT GATGCGCCTG CTGACCCGGC CGCTGGCCCA ACTGGCCAGC
CATGTGGCAG AGCTGCCGGA AAAACGGGGC GCTGAACGCT TCATCCACCT ACCGGTCAAT
GGTGAGATCG GTAACCTGAC CGGAGCCTTC AACAGCATGG TGGAAGAGAT TGACCAAAGC
ACCCAGGCGT TGCGCAACAG TGAGCAGCGC TATCGAATTG TGACTGAGTT TACCAATGAT
TTCACCTACT GGCGACGGCC TGACGGCAGC TTTGAGTTTA TTTCACCAGC CTGTCTCGAA
GTAACCGGCT ACAGTCGTGA AGAACTGTTT GCCCAGCCGT CCCTGATGGA AGAGATGATC
CATCCCGGCG ACCGTGAAAT GTTTGACCGG ATGGCGGCTG AAAGCGGGGA GGAGATCAAC
TGCAACAATG AAGAGCTGGA ATACCGCATC ATCACCAAAG GAGGCAATAC CCGCTGGGTG
CGCCACACCT GCCGCCCGAT CGTTGATGAA AACGGTGTCT TTCTGGGACG CCGGGGCTGC
CGCTCCGATA TCACCGAGCA CAAACAACTG GCTGACCAGG TCTCGCATAT GGTGCTGCAT
GATCTGCTGA CCGGACTGCC CAACCGCTCG CTGTTTGCTG ACCGGCTGTT CCTTGCAACC
GCCCAGAGAG AACGTGGCGA TCACGATTTG ACGGTGGTGT TGTTCTTCGG CATCGACCGT
TTCAAACTGA TTAATGATAC CCTGGGGCAT GAAACCGGTG ACCGGCTCTT GATCATGGTT
GCAGAACGGC TACGGAAGCT GTTGCATCCC AATGACACCC TTTGCCGTTT TGGCGGTGAT
GTCTTTGCCT TTATCCTGCC GGGCCGCGAA AGCCGCCATG AAGCGGTAAC CATGTCGTAC
CGGGTTCTGG CCAGCCTGGC TGATCCCTTC AATCCGTCCG GTCAGCAAGT CACCTTGAGC
GGCAGTATCG GTATTGCCAT CTCCCCCCAG GATGGCACCG ACGCGGAAAC GCTGCAGAAA
AATGCCGAAA CCGCCATGTA CGATGCCAAA CGCAGCGGCA AAAACAGCTT CCGCTTCTAT
GCCCGCGAGA TGAATGCCCA GGCAGCCGAA ATGCTGCGTC TGGACAACAG CATGCCCCAG
GGCCTTGTCA ATGGCGACTT TTACCTCCAC TACCAGCCGC AGCTGAACCT GGAAGACAAC
TCGGTCGTTG CAGTCGAAGC ACTTTTACGC TGGCGCCACC CGGAACTGGG AATGATCCCT
CCTGACCGCT TTATCCCCCT GGCAGAGGAA AGCGGTTTCA TCATAAAGCT GGGCGAATGG
GTGCTGCGTA CTGCCTGTGC CCAGTGCGCG GCATGGCAAC AGGATGGCCC GGCCCCTTTG
CGGATTGCCG TCAACGTATC CGGTTGCCAG TTCAATGAAC CTGATTTTGT TGACATGGTC
TCCACCGCAC TGAGCAGCAG TGGTCTTTCC CCGGAGTATC TTGAACTGGA ACTGACTGAA
AGTCTTTTGA TTTCAAACGA GCAGCAGGCG CTACAAAAAC TGCAATTGCT GAAAAGTATG
GGGATCTATC TGGCCATTGA CGACTTTGGC ACCGGATACT CATCATTGGC CTATCTGAAA
CATTTCCCGC TGGATCGTCT CAAGATCGAC AAATCATTTA TTAACGATAT TCTGACTGAC
CCTGATGATG CCGCCATTAC CGAGGCGATC ATCGCCATGG GACACTCGCT GAAGCTGAAG
GTAATTGCAG AAGGGGTTGA AACGAGGGAG CAACTGCTCT TCCTTGAAGA CAGGGGCTGT
GATGAGATGC AGGGTTACTA CCTGAGCAAG CCGCTGTCTG AGCATGACCT GAAGGTCTTC
ATTACCGCCC GGGCAGCGGA CAGCGCGAAG GAGACAACAT AA
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| Protein sequence | MSFLHPSLRA RMTLAVTGLI LVLMLVTAIV TLTFFEREYE RNMTAQQSDV VRYLAGDVDA
TLSNILEALF VNARSVPDSA LTNPHAAQEY LASRTGLQRF FKNHLHLYGA NGRLIGTSAQ
HHHATSESIA GQQYFKQTMQ QAKPLISDPT SHGHTENQAN IVFTAPVIRG NGQVVAVLTG
SFNLYEKNPL SRYVSITLGK SGILRIISNS GQVLLHARNS RILQNASQGA GPLVEKALRE
GTATGRHIGM DNQVLIASMQ RLNTVNWVLA ASYPETDAYA PVRTARTWFI IATLLGMAVA
VLLVLFMMRL LTRPLAQLAS HVAELPEKRG AERFIHLPVN GEIGNLTGAF NSMVEEIDQS
TQALRNSEQR YRIVTEFTND FTYWRRPDGS FEFISPACLE VTGYSREELF AQPSLMEEMI
HPGDREMFDR MAAESGEEIN CNNEELEYRI ITKGGNTRWV RHTCRPIVDE NGVFLGRRGC
RSDITEHKQL ADQVSHMVLH DLLTGLPNRS LFADRLFLAT AQRERGDHDL TVVLFFGIDR
FKLINDTLGH ETGDRLLIMV AERLRKLLHP NDTLCRFGGD VFAFILPGRE SRHEAVTMSY
RVLASLADPF NPSGQQVTLS GSIGIAISPQ DGTDAETLQK NAETAMYDAK RSGKNSFRFY
AREMNAQAAE MLRLDNSMPQ GLVNGDFYLH YQPQLNLEDN SVVAVEALLR WRHPELGMIP
PDRFIPLAEE SGFIIKLGEW VLRTACAQCA AWQQDGPAPL RIAVNVSGCQ FNEPDFVDMV
STALSSSGLS PEYLELELTE SLLISNEQQA LQKLQLLKSM GIYLAIDDFG TGYSSLAYLK
HFPLDRLKID KSFINDILTD PDDAAITEAI IAMGHSLKLK VIAEGVETRE QLLFLEDRGC
DEMQGYYLSK PLSEHDLKVF ITARAADSAK ETT
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