Gene Glov_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_2771 
Symbol 
ID6368666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp2973785 
End bp2976367 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content55% 
IMG OID642678186 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001953004 
Protein GI189425827 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTA TGCATCGTAT GATGCTGACT GTCTGTTCAG TTGTACTGCT GCTGATGACC 
CTGCCGCTCT TTGCCGGGGC TGCTCCGGTC GTGCGGGTCG GTTATGAACA GAATCACCCC
ATGGCCGGCA CCGCAGACAA TGGCAAGGCC CAGGGGATCA TGATTGATAT TGTGGAGGAA
ATTGCCCGCC AAGAAGGCTG GACCCTTCAC TATGCCCCCT GCATCTGGAG TAAATGTCTC
GAAGATCTTG AGAATGCCAA GATCGATCTG CTGGTGGGTA TCGCCTATAC TCCTGAAAGG
GCTCAGAAAT TCAGTTACAA TCAGCACACC GTCATATCAA ACTGGGGGTT GCTCTACAGC
CGCCCAGGTC AAAGAATTGA GAGCTATACT GATCTGAACG GTAAAAGAAT CGCCGTGGTA
AAAAATGATG TCTACTGCAA TACCTTCATC AGGATGTTGC AGCAGTTCAA TATCCGCTGC
GATCTGGTCT ATGCTGACAA TTTCAAGGAT ATTTTCGACA TGATTGACTG GGGAGAGGTG
GATGCCGGGG TGGCAAACCG CTTCTTCTCG CTCTTGAATG AGCGCTCATT CAAGATAAGG
GCCACCCCGA TTATCTTCAG TCCGGTTTCT GTGCAGGTCG CCGCCCCGAA AGGCAGGAAT
CAGGATGTTC TGTCTGCCTT TGACCGTCAT CTTGAGGCGA TGAAGAAGGA TCGTGATTCT
GTTTATCACC AGTCCCTGAA GCGCTGGCTC GGGATCGAGG GTGCCGGCTA TCTCATGCCG
CGCTGGATCT GGTGGACGCT GGGCGGTGTG GCGGGTGGCG CGCTGCTTTT GGGGATTTTT
GCCCTGCTAC TGCGCCGTGA AGTGCGCCGC AAGACTGCCG ATCTGAATCA TGAAGTTGAG
GAGCGGCGTA AATTGTTTGC GGCTGTTGAG CAGAGTGCCA ACTCGGTTGT CATCACGGAT
ACAGAAGGTG TTATAGAGTA TGTGAACCCC CACTTCTGTA TGGTCACCGG CTATCGCAGC
GAAGAAGTGA TCGGACAAAA GCCCAGCCTG CTCAAGTCAG GGCATCAATC TGCCGAGCTC
TATGCCGATC TCTGGAAAAC CATCAGTGCC GGCCGGGAAT GGCGCGGTGA ATTCCGCAAC
AAGCGTAAGA ATGGTTCTTT GTACTGGGAT CTGTGCAGTA TCGCGCCGAT CAGGAATGAG
GCTGGTGAAA TCACCAATTT TGTTGCCATC AAGGAGGATA TTACCAGCCG CAAGGCCCAG
GAAGAGATCC TGACCTGGCA AGCCGGCCAC GATACCCTGA CAGGCCTGTA TAACCGCTAT
TTTCTGGAGA ACCACCTTAC GGCAGAAATC AAGCGGATGG ACCGGCAGCA CCAGACCCTC
TCACTGCTGC TGATCGATAT TGATAACCTT AAATTTGTTA ACGACACCTT CGGTCATGAC
TTTGGAGACC GCCTCCTGGT TCAGATCGCC GAGCGCCTCA AGCAGGCTGC TTGTCCCCTC
TCCATTGTCG GGCGCTTTCT GGGTAACGAG TTCGCCTTGG TTCCCCCGCT TGCTGAAGGG
CGTGAGCATG CGGTAACACT GGTCAACCGG ATAAAGCAGC AGATGTCCGA GCTGTTTGTT
ATGGACGGGG CCGAGGTGGT GATTACCGTC AGTATCGGTG TGGTTGTCTT TCCGGATGAC
GGAGAAGATG CCGACACCCT GCTGCGTAAT GCCGAGGCAG CCATGTATGA GGCCAAGCGG
CAGGGACGAA ACACGATTGT CTGGTATACG ACCGACTTCC ATAAGCGTGC ACAGTATCGC
CTGATGTTGG CTGCCAGGTT GCACCGGGCC TTTGAAAACA GCGACTTTAC CCTGCAGTAT
CAACCCCAGA TCAGCACGCA GGACAACACG GTGATCGGTG TTGAGGCGTT GCTGCGCTGG
ACGCCTGCTG ATCTGCCCCC GGTCTCACCA ATGGAATTTA TTCCTATTCT CGAAGAAACC
GGCCTGATTG TTCCGGTGGG CACCTGGGTG CTGTATCAGG CCTGTCATCA GGCCGCTGCC
TGGCAGCGGG CCGGACTGCC TCGCATGCGG TTGTCGGTCA ATATCTCGGC GGTTCAGTTC
CAGCGGGGTG ACCTGGGAGA GACGGTGCGT ATGGTCCTGG CAGAAACAGG TCTTGATCCG
GCGCTGCTCT GTCTGGAGCT GACCGAAAGC ATGCTGATGA TTGATACGGC TCAGTCCCAG
CAGAAGCTGC AGGAATTGCG TGATCTGGGG GTTCGTCTCG CGCTGGACGA CTTTGGTACC
GGCTATTCGT CGCTGGCCTA TCTCTCGCGC CTGCCGGTTC AGGAACTCAA GGTTGATCAG
TCTTTTGTCC GCCGGCTGCA TGACACACCG TCCGATACGG CGGTGGTCAA TACCGTCATC
GCCATGGCTC AGGAACTGGG GCTGACGCTG ATTGCAGAAG GGGTGGAAAG TGAAGAACAG
AAATCCCACC TGATCGGTCG CGGTTGTACC ATTATACAGG GCTTTTTATT CTGCAGGCCA
CTGCCGCCGG ATCAGCTTGC CCTGTTTGTC GGCCAAGAGG GGCATGATGA GCCGCAAGCG
TGA
 
Protein sequence
MIPMHRMMLT VCSVVLLLMT LPLFAGAAPV VRVGYEQNHP MAGTADNGKA QGIMIDIVEE 
IARQEGWTLH YAPCIWSKCL EDLENAKIDL LVGIAYTPER AQKFSYNQHT VISNWGLLYS
RPGQRIESYT DLNGKRIAVV KNDVYCNTFI RMLQQFNIRC DLVYADNFKD IFDMIDWGEV
DAGVANRFFS LLNERSFKIR ATPIIFSPVS VQVAAPKGRN QDVLSAFDRH LEAMKKDRDS
VYHQSLKRWL GIEGAGYLMP RWIWWTLGGV AGGALLLGIF ALLLRREVRR KTADLNHEVE
ERRKLFAAVE QSANSVVITD TEGVIEYVNP HFCMVTGYRS EEVIGQKPSL LKSGHQSAEL
YADLWKTISA GREWRGEFRN KRKNGSLYWD LCSIAPIRNE AGEITNFVAI KEDITSRKAQ
EEILTWQAGH DTLTGLYNRY FLENHLTAEI KRMDRQHQTL SLLLIDIDNL KFVNDTFGHD
FGDRLLVQIA ERLKQAACPL SIVGRFLGNE FALVPPLAEG REHAVTLVNR IKQQMSELFV
MDGAEVVITV SIGVVVFPDD GEDADTLLRN AEAAMYEAKR QGRNTIVWYT TDFHKRAQYR
LMLAARLHRA FENSDFTLQY QPQISTQDNT VIGVEALLRW TPADLPPVSP MEFIPILEET
GLIVPVGTWV LYQACHQAAA WQRAGLPRMR LSVNISAVQF QRGDLGETVR MVLAETGLDP
ALLCLELTES MLMIDTAQSQ QKLQELRDLG VRLALDDFGT GYSSLAYLSR LPVQELKVDQ
SFVRRLHDTP SDTAVVNTVI AMAQELGLTL IAEGVESEEQ KSHLIGRGCT IIQGFLFCRP
LPPDQLALFV GQEGHDEPQA