Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2771 |
Symbol | |
ID | 6368666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2973785 |
End bp | 2976367 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642678186 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001953004 |
Protein GI | 189425827 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATACCTA TGCATCGTAT GATGCTGACT GTCTGTTCAG TTGTACTGCT GCTGATGACC CTGCCGCTCT TTGCCGGGGC TGCTCCGGTC GTGCGGGTCG GTTATGAACA GAATCACCCC ATGGCCGGCA CCGCAGACAA TGGCAAGGCC CAGGGGATCA TGATTGATAT TGTGGAGGAA ATTGCCCGCC AAGAAGGCTG GACCCTTCAC TATGCCCCCT GCATCTGGAG TAAATGTCTC GAAGATCTTG AGAATGCCAA GATCGATCTG CTGGTGGGTA TCGCCTATAC TCCTGAAAGG GCTCAGAAAT TCAGTTACAA TCAGCACACC GTCATATCAA ACTGGGGGTT GCTCTACAGC CGCCCAGGTC AAAGAATTGA GAGCTATACT GATCTGAACG GTAAAAGAAT CGCCGTGGTA AAAAATGATG TCTACTGCAA TACCTTCATC AGGATGTTGC AGCAGTTCAA TATCCGCTGC GATCTGGTCT ATGCTGACAA TTTCAAGGAT ATTTTCGACA TGATTGACTG GGGAGAGGTG GATGCCGGGG TGGCAAACCG CTTCTTCTCG CTCTTGAATG AGCGCTCATT CAAGATAAGG GCCACCCCGA TTATCTTCAG TCCGGTTTCT GTGCAGGTCG CCGCCCCGAA AGGCAGGAAT CAGGATGTTC TGTCTGCCTT TGACCGTCAT CTTGAGGCGA TGAAGAAGGA TCGTGATTCT GTTTATCACC AGTCCCTGAA GCGCTGGCTC GGGATCGAGG GTGCCGGCTA TCTCATGCCG CGCTGGATCT GGTGGACGCT GGGCGGTGTG GCGGGTGGCG CGCTGCTTTT GGGGATTTTT GCCCTGCTAC TGCGCCGTGA AGTGCGCCGC AAGACTGCCG ATCTGAATCA TGAAGTTGAG GAGCGGCGTA AATTGTTTGC GGCTGTTGAG CAGAGTGCCA ACTCGGTTGT CATCACGGAT ACAGAAGGTG TTATAGAGTA TGTGAACCCC CACTTCTGTA TGGTCACCGG CTATCGCAGC GAAGAAGTGA TCGGACAAAA GCCCAGCCTG CTCAAGTCAG GGCATCAATC TGCCGAGCTC TATGCCGATC TCTGGAAAAC CATCAGTGCC GGCCGGGAAT GGCGCGGTGA ATTCCGCAAC AAGCGTAAGA ATGGTTCTTT GTACTGGGAT CTGTGCAGTA TCGCGCCGAT CAGGAATGAG GCTGGTGAAA TCACCAATTT TGTTGCCATC AAGGAGGATA TTACCAGCCG CAAGGCCCAG GAAGAGATCC TGACCTGGCA AGCCGGCCAC GATACCCTGA CAGGCCTGTA TAACCGCTAT TTTCTGGAGA ACCACCTTAC GGCAGAAATC AAGCGGATGG ACCGGCAGCA CCAGACCCTC TCACTGCTGC TGATCGATAT TGATAACCTT AAATTTGTTA ACGACACCTT CGGTCATGAC TTTGGAGACC GCCTCCTGGT TCAGATCGCC GAGCGCCTCA AGCAGGCTGC TTGTCCCCTC TCCATTGTCG GGCGCTTTCT GGGTAACGAG TTCGCCTTGG TTCCCCCGCT TGCTGAAGGG CGTGAGCATG CGGTAACACT GGTCAACCGG ATAAAGCAGC AGATGTCCGA GCTGTTTGTT ATGGACGGGG CCGAGGTGGT GATTACCGTC AGTATCGGTG TGGTTGTCTT TCCGGATGAC GGAGAAGATG CCGACACCCT GCTGCGTAAT GCCGAGGCAG CCATGTATGA GGCCAAGCGG CAGGGACGAA ACACGATTGT CTGGTATACG ACCGACTTCC ATAAGCGTGC ACAGTATCGC CTGATGTTGG CTGCCAGGTT GCACCGGGCC TTTGAAAACA GCGACTTTAC CCTGCAGTAT CAACCCCAGA TCAGCACGCA GGACAACACG GTGATCGGTG TTGAGGCGTT GCTGCGCTGG ACGCCTGCTG ATCTGCCCCC GGTCTCACCA ATGGAATTTA TTCCTATTCT CGAAGAAACC GGCCTGATTG TTCCGGTGGG CACCTGGGTG CTGTATCAGG CCTGTCATCA GGCCGCTGCC TGGCAGCGGG CCGGACTGCC TCGCATGCGG TTGTCGGTCA ATATCTCGGC GGTTCAGTTC CAGCGGGGTG ACCTGGGAGA GACGGTGCGT ATGGTCCTGG CAGAAACAGG TCTTGATCCG GCGCTGCTCT GTCTGGAGCT GACCGAAAGC ATGCTGATGA TTGATACGGC TCAGTCCCAG CAGAAGCTGC AGGAATTGCG TGATCTGGGG GTTCGTCTCG CGCTGGACGA CTTTGGTACC GGCTATTCGT CGCTGGCCTA TCTCTCGCGC CTGCCGGTTC AGGAACTCAA GGTTGATCAG TCTTTTGTCC GCCGGCTGCA TGACACACCG TCCGATACGG CGGTGGTCAA TACCGTCATC GCCATGGCTC AGGAACTGGG GCTGACGCTG ATTGCAGAAG GGGTGGAAAG TGAAGAACAG AAATCCCACC TGATCGGTCG CGGTTGTACC ATTATACAGG GCTTTTTATT CTGCAGGCCA CTGCCGCCGG ATCAGCTTGC CCTGTTTGTC GGCCAAGAGG GGCATGATGA GCCGCAAGCG TGA
|
Protein sequence | MIPMHRMMLT VCSVVLLLMT LPLFAGAAPV VRVGYEQNHP MAGTADNGKA QGIMIDIVEE IARQEGWTLH YAPCIWSKCL EDLENAKIDL LVGIAYTPER AQKFSYNQHT VISNWGLLYS RPGQRIESYT DLNGKRIAVV KNDVYCNTFI RMLQQFNIRC DLVYADNFKD IFDMIDWGEV DAGVANRFFS LLNERSFKIR ATPIIFSPVS VQVAAPKGRN QDVLSAFDRH LEAMKKDRDS VYHQSLKRWL GIEGAGYLMP RWIWWTLGGV AGGALLLGIF ALLLRREVRR KTADLNHEVE ERRKLFAAVE QSANSVVITD TEGVIEYVNP HFCMVTGYRS EEVIGQKPSL LKSGHQSAEL YADLWKTISA GREWRGEFRN KRKNGSLYWD LCSIAPIRNE AGEITNFVAI KEDITSRKAQ EEILTWQAGH DTLTGLYNRY FLENHLTAEI KRMDRQHQTL SLLLIDIDNL KFVNDTFGHD FGDRLLVQIA ERLKQAACPL SIVGRFLGNE FALVPPLAEG REHAVTLVNR IKQQMSELFV MDGAEVVITV SIGVVVFPDD GEDADTLLRN AEAAMYEAKR QGRNTIVWYT TDFHKRAQYR LMLAARLHRA FENSDFTLQY QPQISTQDNT VIGVEALLRW TPADLPPVSP MEFIPILEET GLIVPVGTWV LYQACHQAAA WQRAGLPRMR LSVNISAVQF QRGDLGETVR MVLAETGLDP ALLCLELTES MLMIDTAQSQ QKLQELRDLG VRLALDDFGT GYSSLAYLSR LPVQELKVDQ SFVRRLHDTP SDTAVVNTVI AMAQELGLTL IAEGVESEEQ KSHLIGRGCT IIQGFLFCRP LPPDQLALFV GQEGHDEPQA
|
| |