| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2763 |
|---|
| Symbol | |
|---|
| ID | 6367490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2965996 |
|---|
| End bp | 2967474 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642678178 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001952996 |
|---|
| Protein GI | 189425819 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00755044 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AATCCATGCC GCTGCGCCTG GTGATAACCA CGCCAAAGAC CATCCGAAAC
CGGTCCATTG CCGGGGTCTA CCTGATTACC GATCAACAGG ACGACCTGCT TAAACGGGTG
GCCCAGGCCC TGCGTGGCGG GGTGACGGTG CTGCAGTACC GCGCCAAAGA CAAACCCTAT
GAGTTCTGCC TGGAAGAAGG GAGCCAGCTG AAACAGCTCT GCAGCCGTTT TGGCTCCCTC
TTTATCGTCA ACGACGACCT GAGGCTTGCC CATGCCCTGG ATGCCGATGG CGTGCATCTG
GGACAGGAGG ACAGCTCTCC CCAGCAGGCC AGGGAACTGC TGGGACCGGA CAAGATCATC
GGTGTCTCCA CCCATAATCT TGATGAGGCA CTCAAGGCAG AGTCGGACGG CGCCGACTAC
CTGGGATTTG GCGCCATGTA TCCCACTGAC AGCAAATCGA TCACCCATAT GCCCGGCACC
TCCGGTCTGG CTGCCATCCG TGACCGGGTC AAGCTGCCGA TTGTGGCCAT CGGCGGCATC
AGCCCGGCCA ATGCCTGCCG GGTGATTGAG GCCGGCGCCG ATGCAGTTGC CGTCATCTCC
TCGGTGCTGG CAGCCCCCCG GCCTGAGGTG GCTGCCACGG AGCTGCGCCT GCTGTTCAAC
CGGCTGGCCC CCTATCCCCG TGGCGGCGTG CTGACTATTG CCGGCAGCGA CTCCGGCGGC
GGCGCCGGTA TCCAGGCCGA CCTGAAGACC ATTACCCTGC TGGGCAGCTA CGGAGCCTCG
GCCATCACAG CCCTGACCGC CCAGAACACC AGGGGGGTCA AGTCAATTCA CGGCATCCCC
CCCTCCTTTG TCCGGGACCA GATTGATACG GTCCTGACGG ATCTGCCGAT TGATGTGATC
AAGACCGGCA TGCTGCATAC CCCGGCCATC ATCTCGTTAC TGGCCGAGTA CCTGACCGAA
CAGCCCAACT ACTACCCGGT GGTGATCGAC CCGGTCATGG TGGCCAAGGG GGGTGCCTCC
CTGCTTGAAC TGGATGCCGT ATCGATCTTT CAACAGGCCC TGTTACCCCA GGCCTACCTG
TTGACCCCCA ATATCCCCGA GGCAGAACGT CTGCTCAATT GCCGCATCAA CAGTGAGGCC
GCCATGGAAC AGGCAGCCCG GCAATTGCAC GGCATGGGTG CCGCCAATGT CCTGCTCAAG
GGGGGACATC TGAGTGGTGG TGATGCCGTT GATATACTTT TTGACGGTCA GACCATCCAG
CGTTTCAGCT CTGAACGGTT CTTCACCAGC GCCACCCACG GCACCGGCTG CAGTTTTGCC
TCTGCCATCG CCGCCTGTCT GGCCCAGGGT GAGCCGCTGA GAGAAGCAGT TCGCCTGGCT
AAAAACTTTA TCACCACTGC CATCCGCCTG GCCCGCCCGA TGGGCAAAGG CCATGGCCCG
ATCAACCACT ATCTTGCTGC AAAGGAAACA GACCAATGA
|
|---|
| Protein sequence | MSEKSMPLRL VITTPKTIRN RSIAGVYLIT DQQDDLLKRV AQALRGGVTV LQYRAKDKPY
EFCLEEGSQL KQLCSRFGSL FIVNDDLRLA HALDADGVHL GQEDSSPQQA RELLGPDKII
GVSTHNLDEA LKAESDGADY LGFGAMYPTD SKSITHMPGT SGLAAIRDRV KLPIVAIGGI
SPANACRVIE AGADAVAVIS SVLAAPRPEV AATELRLLFN RLAPYPRGGV LTIAGSDSGG
GAGIQADLKT ITLLGSYGAS AITALTAQNT RGVKSIHGIP PSFVRDQIDT VLTDLPIDVI
KTGMLHTPAI ISLLAEYLTE QPNYYPVVID PVMVAKGGAS LLELDAVSIF QQALLPQAYL
LTPNIPEAER LLNCRINSEA AMEQAARQLH GMGAANVLLK GGHLSGGDAV DILFDGQTIQ
RFSSERFFTS ATHGTGCSFA SAIAACLAQG EPLREAVRLA KNFITTAIRL ARPMGKGHGP
INHYLAAKET DQ
|
|---|
| |