Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2679 |
Symbol | |
ID | 6368381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 2874559 |
End bp | 2875938 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642678094 |
Product | diguanylate cyclase |
Protein accession | YP_001952912 |
Protein GI | 189425735 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTCT GCCTGTTGTT TGACATTAGC AGCACTATCG TCTACATATC TAGATACAAA AGCCTACCGC TCATCGTCAA AACAGATCCA TGCCTCAGGA TGCGTATGCC GAACAATCGC CTCAAATTTG CCCGCAAGTT TCTGATTGGT GCCGTGATTA TCATCAGTCT GGTCATCTGC GGAATTTTTC TGGCCTTTAA CATGCGGGCC GAAGAGTTGA CCGTCAGTAT GATCCACCAA CAGGCCAAGG CGTTGTTTCA ACAGGTGATC CTGATCCGCC GCTGGGTCAC CGGCTACGGT GGCGTCTATG TCGAGGTCAA GCCCGGCGTC AACCCCAACC CTTTCCTGAC CAGCCTGCCC GGCCTCAAAG TCAATATTGT CGACAAGGAC AACAACAAGC AGTACACCCT GCGCAACCCC GGCCTGGTAA CCCGTGAAAT GTCACAGCTT TCAACAGAGG CTGAAGGCTA TTCGTTCCAT GTCTCAAGCC TGAAACCGGT CAACGTCGAA ACCAACTCCC CTGACGTCTT TGAACGCACA TCGCTGCTCA GGTTTGAGCA GGGCGCCCGT GAGACATTTA CGATCGAACA GCGTCCCGGC GGTCCGGTCT ACCGTTATAT GGCGCCGCTT GCCTACGAAA CCACCTGCAA CCGCTGCCAC AGTAACCAGG GCTACAAGGT CGGTGACATC CGCGGCGGCA TCAGCGTCTC TATCCCGATG AAGGAAGTGG TTGCCAAGAT GCGGATGAAC CGTCTGCTGA CTGCAGCCTC TGCGGTACTG GTACTGGGCC TGCTGCTGGG ACTGCTGGCG GTTATCAACA ACCGTTTCCT TAAGGAGTTA CGTGAGGCGC AGGAAAAGCT GGTCGAAATG GCAACCATCG ACTCGCTTAC CGGCCTGCTG AACCGGAGAG CCGGTCTGGA ACGGGTTGAA GAAGAACTTT CGCGCCATCA ACGGTCTGAA CGGGCGTTTG CCTGTCTGTT GCTGGATATC GACCGTTTCA AGAAAATCAA CGACACCTAT GGTCATCAGG CAGGTGATGC CGTGCTCAGC GAGTTTGGTG CAACACTCCG GAGGCATGTC AGAAAACATG ACATAGTCTG TCGCTACGGG GGAGAGGAAT TCCTGTTATT ACTGCCGGAC ACCTCACCTT CGGCTGCCCG GACAACAGCC GAAAAAATCA GGGCAGTTAC GGCAGCAACA CCAATCATGT TTGCCGGCAG ACAGATAGCC GTTACCACCA GTATCGGGAT CAGTATGATG CAGGGGGATG AGACGGCAAA GGCCATGATA GCCCGCGCCG ATGCGGCACT CTATGAGGCA AAAAACTCAG GCCGGAACCG GGTGGTCTGC GCAGAAGCAA ATGAACTGCA GGCAGACTGA
|
Protein sequence | MSLCLLFDIS STIVYISRYK SLPLIVKTDP CLRMRMPNNR LKFARKFLIG AVIIISLVIC GIFLAFNMRA EELTVSMIHQ QAKALFQQVI LIRRWVTGYG GVYVEVKPGV NPNPFLTSLP GLKVNIVDKD NNKQYTLRNP GLVTREMSQL STEAEGYSFH VSSLKPVNVE TNSPDVFERT SLLRFEQGAR ETFTIEQRPG GPVYRYMAPL AYETTCNRCH SNQGYKVGDI RGGISVSIPM KEVVAKMRMN RLLTAASAVL VLGLLLGLLA VINNRFLKEL REAQEKLVEM ATIDSLTGLL NRRAGLERVE EELSRHQRSE RAFACLLLDI DRFKKINDTY GHQAGDAVLS EFGATLRRHV RKHDIVCRYG GEEFLLLLPD TSPSAARTTA EKIRAVTAAT PIMFAGRQIA VTTSIGISMM QGDETAKAMI ARADAALYEA KNSGRNRVVC AEANELQAD
|
| |