| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2544 |
|---|
| Symbol | |
|---|
| ID | 6368350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2723651 |
|---|
| End bp | 2725939 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642677960 |
|---|
| Product | RNA binding S1 domain protein |
|---|
| Protein accession | YP_001952778 |
|---|
| Protein GI | 189425601 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.493353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA ATCAGCAACA GCTTGCAGCG ATAGAAAAAA TCATTACCGA AGAGACCGGG
CTCAGGCAGG GTCAGATCAG CAACACCGTC AACCTGCTGC AGGAAGGGGC CACGGTCCCC
TTTATAGCCC GTTACCGCAA GGAGCAGACC GGCGAGCTGG ATGAGGTGCA GATCCGTACG
ATTGAGGAAC GGCTGGCCTA TTTCACGGAA CTGGAGGCCC GGCGTCAGAC CATTCTGGCC
TCGATTGATG AACAGGGTAA GCTGACCCCT GAACTGCAGG CCCGTATCGA GGCGACCCGC
CAGAAGACCG AACTGGAAGA TCTCTATCTG CCGTACAAAC CCAAGCGTCG TACCAAGGCC
ACCATTGCCA AGGAACGGGG ACTTGAACCG CTGGCCGATC TGATGGCAGC CCAGGAGTTG
ACCAGCGGCA GCGCCCTGGA GGCAGCAGCC CCGTTTGTTG ATCATGAAAA GGAGGTCCCC
ACACCTGAGA CTGCCCTGGA AGGGGCCGGG CATATCCTGG CCGAGCGGTT GGCTGATGAT
GCCGATTGCC GGGCCATGGT GCGCCGCCTG ACCTGGGAAC AGGGGGTCAT GGTCACCAAG
GTTGCATCGG ACAAGAAGGA GCAGGTCACC AAGTTTGAGA TGTACTATGA TTATCAGGAA
CCGCTGAAGG AGATCCCTTC CCACCGGATG CTGGCTATGC GACGGGGTGA AAAGGAAGAG
GTGCTGCGGC TTTCCCTGCA GGTGCCCCAG GCCGAGATTC TGGCTGGCCT CAAGCATCGT
CTGATCAAGG GCGAGAGTGT CTTCAAACCC TGGCTGGAAT CGGTGGCTGA GGATGCCTAC
AAACGTTTGA TCGCCACTTC CATTGAAGTT GAACTGCGGT TACAGGCCAA GGATCTGGCT
GATGAGGCGG CCATTGCCAT TTTCGCAAAA AACCTGAAGA ACCTGCTGCT GGCCCCACCT
GCCGGGGGCA GGCGGGTGCT GGGGATCGAT CCAGGTCTGC GGGCCGGTTC CAAGCTGGCA
GCGGTGGATC AGACCGGCAG GTTTCTGGAG CATGTCACCA TCTATCCCCA CACCGGCGCC
GGTCGGGTGG ATCAGGCCAG AGCAGACCTG CTGCGGCTGG TGGAGGCCCA CGGAATTGAG
ATGATCGCCA TCGGTAACGG CACTGCCGGG CGGGAGATGG AACTGTTCAC CAAAGAGACC
CTGGCCAAGG CGGGTAAACA TCTGCCGGTG GTGATGGTCA GTGAGGCCGG GGCCAGTATC
TATTCTGCCT CGGAGATTGC CCGGGAGGAG TTTCCTGAGC TGGACCTGAC TGTGCGGGGT
GCGATCTCCA TTGCCCGCCG TCTGCAGGAC CCGCTGGCAG AGCTGGTCAA GGTCGACCCC
AAGAGCATCG GCGTGGGGCA GTATCAGCAC GATGTCAATC AGGCCATGTT GAAGAAGAGT
CTGGATGAGG TGGTGGAATC CGGGGTTAAC TACGTGGGGG TGGATCTCAA CACCGCCTCC
TGGGCGTTGT TGTCCTATGT GGCCGGGGTA GGGCCTGCCC TGGGTAAGGC CATCGCCCGG
CATCGTGATG AAAACGGTCC GTTCAGTTCC CGCAAAGGTC TGCTGAAGGT CTCCCGTTTT
GGTGCCAAGG CCTTTGAACA GGCTGCCGGA TTCCTGCGTA TCCGTGGCGG GAAACATCCC
CTGGATAACT CTGCAGTCCA CCCGGAACGC TACCCGTTGG TGGAACAGAT GGCCAAAGAT
CTGGGAGTCT CCCTCGAAGA GCTGGCCAAA ACTCCTGCCT TGGCAGAAAA GATCGACCTG
AAGAAGTACG TCAGTGATCA GGTTGGATTG CCGACCCTGC GGGATATTCT GGAGGAACTG
AAAAAGCCGG GCCGTGACCC GCGCCAGCAG TTCCAGACCG CTGATTTCAG GGATGATATC
CGTGAGATCA GTGACCTGCA GGAAGGGATG ATCCTGCAGG GGGTGGTGAC CAATGTAACC
GCCTTTGGCG CCTTTGTGGA TATCGGGGTG CATCAGGACG GTCTGGTGCA TGTCAGCCAC
CTGGCCAACC GTTTTATCAA GGACCCCAAT GATGCGGTAC AGGTGGGGCA GGTGGTCAAG
GTCAAGGTGC TGTCTGCTGA TCCGCAGCGC AAGCGGATCG CCTTATCCAT CAAAGAGTCT
GAGCCCGGCG GTGCAGCGGT GCGTAAAGCC GCATCTCCTG CTGCCCAGCC AAAACAGGAA
CCAAAGAGTA CAACAGGCGG CCTTGATCTG AGCGCCCTGA AAAAATCAGG ATTTCGGGTC
CGGAGTTAG
|
|---|
| Protein sequence | MALNQQQLAA IEKIITEETG LRQGQISNTV NLLQEGATVP FIARYRKEQT GELDEVQIRT
IEERLAYFTE LEARRQTILA SIDEQGKLTP ELQARIEATR QKTELEDLYL PYKPKRRTKA
TIAKERGLEP LADLMAAQEL TSGSALEAAA PFVDHEKEVP TPETALEGAG HILAERLADD
ADCRAMVRRL TWEQGVMVTK VASDKKEQVT KFEMYYDYQE PLKEIPSHRM LAMRRGEKEE
VLRLSLQVPQ AEILAGLKHR LIKGESVFKP WLESVAEDAY KRLIATSIEV ELRLQAKDLA
DEAAIAIFAK NLKNLLLAPP AGGRRVLGID PGLRAGSKLA AVDQTGRFLE HVTIYPHTGA
GRVDQARADL LRLVEAHGIE MIAIGNGTAG REMELFTKET LAKAGKHLPV VMVSEAGASI
YSASEIAREE FPELDLTVRG AISIARRLQD PLAELVKVDP KSIGVGQYQH DVNQAMLKKS
LDEVVESGVN YVGVDLNTAS WALLSYVAGV GPALGKAIAR HRDENGPFSS RKGLLKVSRF
GAKAFEQAAG FLRIRGGKHP LDNSAVHPER YPLVEQMAKD LGVSLEELAK TPALAEKIDL
KKYVSDQVGL PTLRDILEEL KKPGRDPRQQ FQTADFRDDI REISDLQEGM ILQGVVTNVT
AFGAFVDIGV HQDGLVHVSH LANRFIKDPN DAVQVGQVVK VKVLSADPQR KRIALSIKES
EPGGAAVRKA ASPAAQPKQE PKSTTGGLDL SALKKSGFRV RS
|
|---|
| |