| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2532 |
|---|
| Symbol | |
|---|
| ID | 6368261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2706990 |
|---|
| End bp | 2708189 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642677948 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001952766 |
|---|
| Protein GI | 189425589 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0679268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA GCCACAAAAC AACATCCCCG GCCAGGCAGA CCGGCGCGGA TGCAGAACAG
GCCCGCATTG CCCGGAATGA GTTTCTCACC AACATGAGCC ACGAGATCCG CACGCCGATG
AACGGCGTGA TCGGCATGGC ACAGCTGTTG CGGACCACGC CGCTGGACGC CGTCCAGAAG
GAGTACCTCG ACTGCCTGGA AGTCTCAGCC AAGAGTCTGA TGTACCTGAT TAACGACATC
ATTGACTTCT CCAAGATTGA AGACGGCCAG GTTGAGCTGG AAGAGGTTGA CTTCAGCCTG
CGCGCCACCA TCAACAACAT CATCAAGACC CAGCATGCCG ACCTGCATAT CAAAGGACTG
GACCTGCTGA TCGACATCCC CCATACCGTA CCCGACGCCC TCAGGGGTGA TCAGCTGCAT
ACCAAGCAGA TCATTCTCAA CCTGCTGGGC AATGCCATCA AATACACCGT ACAAGGGACC
ATCAGGCTGG CGGTCAGCGT TATCGAGCAG CAGGAGGATC AGATCCTGCT GCTGCTGAGC
ATCAACGACA CCGGCGTCGG CATTGACGAA GAAAATCTGG CCAAGCTGTT TGCACCGCTG
CTCCAGACCA GCTCACCGGC AAACCAGAAA CTGGGAGCAA AGGGGTTGGG ACTTTCGATC
AGCAGGCGGC TGGTTGAGCT GATGGGCGGC AGAATCTGGG CTGAAAGCAA CGTTGGTGTC
GGCAGCAGCT TCCACCTGGC ACTACCCTTT ATCGTGGCAC GCAGAACTGC TGCATCCGAT
ACCGAGGAGG AACAGGACGT CATCTCTTCT CAGTGGCAAG GTCCGGCCTT ACAGATCCTG
CTGGCTGAAG ACAACGCCAT TAACCAGAAA TTTGCAGTCA CCATCCTTGA ACGGATGGGG
CACCGGGTCA CCAGCACCAA CAACGGCAAG GAAGCAGTGC AACTCTGGAA ACAAGGAACG
TTTGATCTGA TTCTGATGGA TATCCAGATG CCGTTGCAGG ACGGAAAGGC CGCAACAGCC
GCCATCAGAA AAGCGGAAGA CGGCACTGAC CGGCATATAC CGATCATTGC CCTGACCGCC
CACGCCCTGC AGGAAGAAAA GCTGCAACTG CTCAGCTCAG GCTTTGACGG CTATGTTCCC
AAACCGATGG AGATCAGCGT GCTGACCAGC GAGATGTACA AGGTACTCAG ACAGCCTTGA
|
|---|
| Protein sequence | MATSHKTTSP ARQTGADAEQ ARIARNEFLT NMSHEIRTPM NGVIGMAQLL RTTPLDAVQK
EYLDCLEVSA KSLMYLINDI IDFSKIEDGQ VELEEVDFSL RATINNIIKT QHADLHIKGL
DLLIDIPHTV PDALRGDQLH TKQIILNLLG NAIKYTVQGT IRLAVSVIEQ QEDQILLLLS
INDTGVGIDE ENLAKLFAPL LQTSSPANQK LGAKGLGLSI SRRLVELMGG RIWAESNVGV
GSSFHLALPF IVARRTAASD TEEEQDVISS QWQGPALQIL LAEDNAINQK FAVTILERMG
HRVTSTNNGK EAVQLWKQGT FDLILMDIQM PLQDGKAATA AIRKAEDGTD RHIPIIALTA
HALQEEKLQL LSSGFDGYVP KPMEISVLTS EMYKVLRQP
|
|---|
| |