Gene Glov_2457 details

Gene Information

• Locus tag: Glov_2457
• ID: 6368384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 2621370
• End bp: 2623241
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642677873
• Product: type II secretion system protein E
• Protein accession: YP_001952691
• Protein GI: 189425514
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.402344
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCA CGCAGGAAGT CAAGATCGGG GTTATTCCAA CCCTGCTGAT CAAGGACGGT 
ATCATTACCC ATGATCAACT GGCGTATGCG GTGCGGGTCC ACAGCAAGCT CACCACACCT 
CAGACCATGC TGGACACCCT GCTGGAGCTG GGGCTGATCT CGCAGGAACA GCTGCAGGTC 
ACCCTGCGCA AACATCAGCT CAATCTACGG CTCGGCGATC TTCTGCTGGA ACTGGGGTAC 
CTGCGCGATA TTGACCTGCA ACAGGCCCTG GCCATCCAGA AAGAATCACA GGGACAGCGC 
AGACTGGGTG ACGTACTGGT TGAAAACGGC TTTATTGAAG AGCGCAAACT GCTGGAGACC 
CTTTCCTATC AGCTCGGCTA CCCCCTGATT GATCCCGACT TTGTCAAGAT AGACAAGACA 
CTGCTGGCCC GCCTTCCGTT GAATGTCTGT CATCAATTCA ATGTCCTGCC GCTCTACCGT 
CAGGGTGAAC AGCTGGTGGT GACCTTCGCT GATCCGCTTG ATCAGCGTGC CCGTGACATC 
GTTGCCGCCC ATCTCGGCAA CTTCATCCCG GCCATCTGCT CAAAAAATTC ACTGAAAGAG 
GCGCTTGCCG CGCTTGAACA TGCCGGTCAG ACCGTTGCAG CCGATGACAA CACCATCATC 
GGTATGATCA ACCTCCTGTT TGAAGATGCG ATTGAGGAGC AGACCAGCGA TATCCATATT 
GAGCCGCAGA AGGATCGGCT GCGGGTGCGT TTCCGCCGGG ACGGCGTGAT GGGGCACTAC 
AAGGATTTCC CCAAAGATAT TGCTCCCCAG CTCACCACCC GCATCAAGGT CATGGCCCAG 
GCCGACATTG CAGAAAAGCG CCGCCACCAG GATGGCCGGA TCCTCTTTAC CAGCCGCAAA 
CATGGCATTA ACCTTGACCT GAGGGTTTCT TTCTTCATCA CCATCTATGG TGAAAAGGTG 
GTATTGCGGC TGCTGAACAA CAAGGGCACC CTGCTGGACG TCAAGGAAAT CGGCATGGCC 
CCCCGCATGC TGGAGCATTT CATTTACGAC GCCCTGGAGG TGCCCACCGG GGTCATGATC 
GTCACCGGCC CGACCGGCTC CGGCAAGACA ACCACCCTGT ACGGTTGCGT CAACCACCTG 
AATGATATCA ACACCAGTAT TATCACGGCA GAAGATCCGG TTGAGTATGT GATCGACGGA 
ATCTCCCAGT GTTCGATCAA CCCCAAGATC GGTGTCACCT TTGAAGAGAC CCTGCGCCAT 
ATCGTGCGCC AGGACCCGGA TGTTATTGTA CTGGGTGAGA TCCGGGACCA GTTCTCGGCG 
GAAGTAGCCA TCCAGGCGGC CCTGACCGGC CACAAGGTCC TGACCACTTT CCACACGGAA 
GACTCAATCG GCGGCCTGAT CCGCTTGATG AACATGAATA TTGAGGCGTT TCTGATCTCC 
TCCACGGTGG TCTGTATTGT AGCCCAGCGT CTGCTGCGCA GAGTCTGCCC GGAATGTGCC 
GAACCGTACG TCCCGACGCC GCTCGACCTG ACCCGCCTGG GACTTTCTAC CCATGACCTG 
CAAGGGTCTG AATTCAAGCT TGGCCGGGGC TGTAAAAACT GCCGTTTCAG CGGCTATCGC 
GGCAGGGTGG CGATCTTTGA ACTGCTGGTG ATGAACGAGA TGGTTAAAAA TGCCATCCTC 
GACCACAAAA GTTCCTATGA AATCAGAAAG ATCAGCGTTG AGACCTCTGG AATGGTAACA 
CTGATGGAGG ATGGCCTGGT AAAAGGGGCA CGGGGACTTA TTTCAATGCA GGAGATCATT 
ACCGACCTGC CACGCCTGGG CAAGCCACGG CCGTTGCATG AACTGCGCAG AATTCTGGGG 
GTACAACGAT GA 

 

Protein sequence

MKSTQEVKIG VIPTLLIKDG IITHDQLAYA VRVHSKLTTP QTMLDTLLEL GLISQEQLQV 
TLRKHQLNLR LGDLLLELGY LRDIDLQQAL AIQKESQGQR RLGDVLVENG FIEERKLLET 
LSYQLGYPLI DPDFVKIDKT LLARLPLNVC HQFNVLPLYR QGEQLVVTFA DPLDQRARDI 
VAAHLGNFIP AICSKNSLKE ALAALEHAGQ TVAADDNTII GMINLLFEDA IEEQTSDIHI 
EPQKDRLRVR FRRDGVMGHY KDFPKDIAPQ LTTRIKVMAQ ADIAEKRRHQ DGRILFTSRK 
HGINLDLRVS FFITIYGEKV VLRLLNNKGT LLDVKEIGMA PRMLEHFIYD ALEVPTGVMI 
VTGPTGSGKT TTLYGCVNHL NDINTSIITA EDPVEYVIDG ISQCSINPKI GVTFEETLRH 
IVRQDPDVIV LGEIRDQFSA EVAIQAALTG HKVLTTFHTE DSIGGLIRLM NMNIEAFLIS 
STVVCIVAQR LLRRVCPECA EPYVPTPLDL TRLGLSTHDL QGSEFKLGRG CKNCRFSGYR 
GRVAIFELLV MNEMVKNAIL DHKSSYEIRK ISVETSGMVT LMEDGLVKGA RGLISMQEII 
TDLPRLGKPR PLHELRRILG VQR