| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2441 |
|---|
| Symbol | |
|---|
| ID | 6367546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2610383 |
|---|
| End bp | 2612059 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642677857 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001952675 |
|---|
| Protein GI | 189425498 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00204105 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTTG ACGACAAAAA AGTTATCTAT AGTATGATGC GGGTATCGAA GTTCTACGAC
AAGAAACCGA TTATCAAGGA CATTTCCCTG TCCTACTTCT ATGGCGCCAA GATCGGTGTG
CTGGGCCTGA ACGGCTCCGG TAAATCGACC CTGCTGAAGA TCATGGCCGG GGTGGACACC
GAGTTTAACG GTCAGGTGGC GTTGTCACCC GGTTATACCG TAGGGTATCT GGAACAGGAG
CCAAAGCTGG ACGAGAACAA GACCGTCCGG CAGGTGGTTG AGGAAGGCTG CCAGGAGATC
GTTGACCTGT TGGCCGAGTT CAACGGCATT ACCGACAAGT TTTCCGAACC GGATGCCGAT
TTTGAAAAGC TGTGCGACCG CCAGGCGGTG CTGCAGGAAA AGCTGGACCA TCTGGATGCC
TGGGATCTGG ACTCCCGTCT TGAGCTGGCC ATGGATGCCC TGCGCTGCCC CGATGGCGAC
ACGCCGGTCA AGGTGCTTTC CGGCGGTGAA AGAAGACGGG TGGCCCTCTG CCGCCTGCTG
CTGAAAAAGC CGGACATCCT GCTGCTGGAC GAACCGACCA ACCACCTGGA TGCCGAGACC
GTGGCCTGGC TGGAAAAACA CCTGCACAGC TACAGCGGCA CCGTGATCGC CGTTACCCAC
GACCGTTATT TCCTGGATAA CGTGGCCGGC TGGATTCTGG AGCTGGACCG CGGCGAAGGG
ATCCCCTGGA AAGGCAATTA CTCCTCCTGG CTGGAGCAGA AACAGGGACG TCTGGCGGTT
GAGGAGAAGC AGGAGAGCGA ACGTCAGAAG ACCCTGAAAC GCGAGCTGGA ATGGATCAGG
ATGTCGCCCA AGGGCCGTCA CACCAAGGCC CAGGCACGGA TCAGCAAATA CGAGGATCTG
GCAGCCCAGG AAGGTGAGGC ACGGGGCAAG GATCTGGAAC TGTACATCCC GGCCGGCCCG
CGGCTGGGGG ATATCGTGAT CGAGGCGGAC AATGTCAGCA AAGGTTTCGG TGACCGGCTG
CTGTACGAAG GGATGACCTT CAAGCTGCCC CGCGGCGGGA TCGTTGGCGT AATCGGCCCC
AACGGTGCCG GTAAGACCAC CCTCTTCCGG ATGATCACCG GTACGGAGAC GCCGGACAGC
GGCACCATCA GGATCGGTGA CACGGTCCAG GTTGCCTATG TGGACCAGAG CCGTGACAGC
CTCAACCCGG ACCGCCTGTT ATGGGAAGAG ATCAGCGACG GGCAGGAGAT GATCCAGCTG
GGCAGGCAGA CCGTCAATGC CCGCAACTAT GTGGCCCGCT TTAACTTTAC CGGCGGCGAC
CAGCAGAAAA AGGTGGGGAT GCTGTCCGGC GGCGAACGCA ACCGGGTCCA CCTGGCCAAG
GTGCTGAAGA GCGGCGCCAA CGTGCTGCTT CTGGACGAAC CGACCAACGA CCTGGATGTC
AACACCATGC GGGCCCTGGA GGAAGGGCTG GAAAACTTCG GCGGCTGCGC CGTGGTTATC
TCCCACGACC GCTGGTTCCT GGACCGGATC GCCACCCATA TCCTTGCCTT TGAAGGGGAT
TCAAAGGTAA CCTGGTTTGA AGGCAACTAC TCCGAATATG AGGAGGACCG CCGCAAACGC
CTTGGCAGCG AAGCGGACCG CCCGCACCGG ATCACCTATC GCAAACTGAC CCGCTAA
|
|---|
| Protein sequence | MSVDDKKVIY SMMRVSKFYD KKPIIKDISL SYFYGAKIGV LGLNGSGKST LLKIMAGVDT
EFNGQVALSP GYTVGYLEQE PKLDENKTVR QVVEEGCQEI VDLLAEFNGI TDKFSEPDAD
FEKLCDRQAV LQEKLDHLDA WDLDSRLELA MDALRCPDGD TPVKVLSGGE RRRVALCRLL
LKKPDILLLD EPTNHLDAET VAWLEKHLHS YSGTVIAVTH DRYFLDNVAG WILELDRGEG
IPWKGNYSSW LEQKQGRLAV EEKQESERQK TLKRELEWIR MSPKGRHTKA QARISKYEDL
AAQEGEARGK DLELYIPAGP RLGDIVIEAD NVSKGFGDRL LYEGMTFKLP RGGIVGVIGP
NGAGKTTLFR MITGTETPDS GTIRIGDTVQ VAYVDQSRDS LNPDRLLWEE ISDGQEMIQL
GRQTVNARNY VARFNFTGGD QQKKVGMLSG GERNRVHLAK VLKSGANVLL LDEPTNDLDV
NTMRALEEGL ENFGGCAVVI SHDRWFLDRI ATHILAFEGD SKVTWFEGNY SEYEEDRRKR
LGSEADRPHR ITYRKLTR
|
|---|
| |