| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2390 |
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| Symbol | |
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| ID | 6366397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2566358 |
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| End bp | 2568010 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642677808 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_001952626 |
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| Protein GI | 189425449 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.517187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTG AATCTACGGT TTCAACCTAT CTGCTGCAGC GCCTGAAGGA GCTGGGAGTC
AATCATCTCT TTGGTGTGCC GGGCGATTAC GTGCTGGATT TTCTTGACCA GGTGATCGAG
AGCCCGCTTG CGTGGGTCGG CACCTGCAAT GAACTGAATG CCGGTTATGC CGCCGACGGC
TATGCCCGTC TGAACGGCCT GGGCGGTGCC GTGGTGACCT ACGGGGTGGG GGGCTTCAGT
ATTCTGAATG CCGTGGCGGG TGCGTTTGCG GAGATGGTGC CGCTGGTGCT GATCAGCGGC
GCTCCTCCCA CCGGACGGCG CAAGGCCGGG GCGCTGGTGC ACCACCTGGT GGCGGATTAC
AACCGGCAGC TGGAGATATT CCAGAAGGTG ACGGTTGATG CTGCCCTGCT GGATAACCCG
GAGACGGCAC CGGCACTGAT CGACCGCCTG CTGGCAACCT GTATCAGCCG CAAACTGCCG
GTCTATCTGG AACTGCCTGC CGATATGGCC CGCGCTGCCT GCCTGCCCCC CTCTGCGCCC
CTGCTGCCGG CTGCCAGAAG TTCCGCCCCG GACAGCCTGA AGGCCTGTGC AGATGCCGCT
GCAGCGCTTC TGAACAGGGC CGTCAATCCC GCCATCCTGG CCGGTATCGA GGTGTCCCGT
TTCGGTCTGG GGCCGGCACT GTTGCAGCTG GTTGAGCAGG CCGAACTGCC CTTTGCCACC
ATGCTCAGCA GCAAATCGGT CCTGCCGGAG CTGCATCCCC AGTTTATCGG CCTCTATCAG
GGGGGCTGGA GCAGACCGGC GGTTCAGCAG CAGATCGAGT CGGCCGATTG CCTGCTGTCA
CTGGGGGCCT GGATGACTGA CCTGGATACC GGCATCTTCA GCATCCATAT CGATCCACAG
CGGGTGATCG AGGTGGGGCG GGATGCGGTA CGGATCGGCG ATCGTCAGTA TCCCGATATC
CTGCCGGGCG ATCTGATCCG GGAACTCGTG CCTAGACTGC GTCCCCGTTC CTATCTGGAA
CTGCACCCCG GTGAACCGCG CGCCGCCTGC GGAGCGTTTG TTCCTGATAC CGCAACTGCG
CTTACGGCAG CGAGGATGTA CGAGGCGATC CACGGTTTTC TGGATGACAG CATGATTCTG
TTAGCGGAAC CGGGTGATGC CTTCTGTGCA GCACCGGAGT TTACCATTGA AGAGGCGGAG
CGCTTCATTG TCCAGTCCTT CTACTCCTCA ATCGGCTACT GCACCCCTGC TGCGCTGGGG
GCAAGGCTGG CCCGGCCCGG CAGACGACCG GTGGTCATGA CCGGTGACGG CGCTTTCCAG
ATGACTGCCC AGGAGGTTTC AACCCTGGTG CGGTTACAGA TTCCGGCAGT TGTGCTGGTG
ATCAACAACG ACGGCTACCT GGTTGAGCGG ATGCTGCATG AGGACGGTCC CTACAATGAT
ATCCGGATGT GGCGCTATGC TGCGCTTCCG GAGCTGTTCA ATGCAGGTTC AGGCGGGCTC
GGCATCCGGG TAACAACTGA AGGCGAACTG CATGCCGCCC TGCAGACCGC AGCTGCAGCA
CCGGATAAAC TGGTGTTGAT CGAGATGTGT GTGCAGAAGC TGGACTGTTC CGCAGGGCTG
CGCCGACTTG GGGCCACCAT GCGCAAAGGG TAG
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| Protein sequence | MPTESTVSTY LLQRLKELGV NHLFGVPGDY VLDFLDQVIE SPLAWVGTCN ELNAGYAADG
YARLNGLGGA VVTYGVGGFS ILNAVAGAFA EMVPLVLISG APPTGRRKAG ALVHHLVADY
NRQLEIFQKV TVDAALLDNP ETAPALIDRL LATCISRKLP VYLELPADMA RAACLPPSAP
LLPAARSSAP DSLKACADAA AALLNRAVNP AILAGIEVSR FGLGPALLQL VEQAELPFAT
MLSSKSVLPE LHPQFIGLYQ GGWSRPAVQQ QIESADCLLS LGAWMTDLDT GIFSIHIDPQ
RVIEVGRDAV RIGDRQYPDI LPGDLIRELV PRLRPRSYLE LHPGEPRAAC GAFVPDTATA
LTAARMYEAI HGFLDDSMIL LAEPGDAFCA APEFTIEEAE RFIVQSFYSS IGYCTPAALG
ARLARPGRRP VVMTGDGAFQ MTAQEVSTLV RLQIPAVVLV INNDGYLVER MLHEDGPYND
IRMWRYAALP ELFNAGSGGL GIRVTTEGEL HAALQTAAAA PDKLVLIEMC VQKLDCSAGL
RRLGATMRKG
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