| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2372 |
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| Symbol | |
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| ID | 6368509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2546057 |
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| End bp | 2547844 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642677790 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001952608 |
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| Protein GI | 189425431 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGACAC AGTCAAAACT GACCATTGAA TATCTGACCG CGTTACTGTT TGAAAAAAAA
CTGCTCACTG GCGATCAGCG GGCCATGGTG CTGGCCAAGG CCAAGGCCCA GGAGGCCCGC
CTGACAGCGG GTCCCCAGGC CGGCGGGCGC CGTCTGCATC GTGGGGGGGA GGCGCCGTCA
CCTGCCCAGC TGCTGGCTTC ATTCAACCTT GAGACGCCTG GTGGAAACGG ACGTATTCTG
TCGGAGGATG CCATAACGGA AGCGCTGGCG TCGTTTCTGA ATATCCCCTA TCTCAAGATT
GACCCGCTCA AGCTTGATCT TGATGTGGTC ACCTCCTATA TCCCGCGTCC CTTTGCCTTG
AAACACCTGA TCGTGCCGGT GGCCACCCGT GACGGTGAAC TGGCAATCGC GGTGGTTGAT
CCCTTTAATG ATCAGGTGCT GAGCGAGTTT GCCACTGCCC ATCGCCTTAA GGTCCGGCGG
GTACTCAGTT CATGCAGCGA CATCCAGAAA ATACTGCGTG AGTTTTACGG TTTCCGGGCC
TCAGTCCTGG CTGCCGAGGC AGAGTCCTCC ACGACCATTG ACCTGGGGAA CCTTGAGCAG
CTCTTCAAGT TGAAAGGAGA GCATGAGCTT GAAGGGAATG ACCGTCACGT CATATCTGCA
GTGGATTTTC TGCTCTCCTA CGCCTTTGAC CAGCGTGCCA GCGATATCCA TATTGAGCCA
AAGCGGGAGA AATGTCTGAT CCGCTTCCGG CTGGACGGCC TGTTGCATAA TATCCATCTG
CTGCCCAAGC CGTTGCATGC TCCGATTGTT TCCAGGATCA AGATCCTGTC ACGCATGGAT
CTGGCTGAAA AGCGACGCCC TCAGGATGGC CGGATCAAGA CCAGCCATAA CAACAAAGAG
GTGGAACTGC GGGTTTCCAC CGTGCCGACC GCCTTTGGCG AAAAGGTGGT TATCCGGATC
TTTGACCCGG ATATCCTGTT TCAGGAACTG GATTCAATCG GCTTTTATAC GCGGGAATAC
TCTCTGTATA ACAGCTTTAT CCACCGTCCC AACGGGATCA TTCTGGTCAC CGGTCCAACC
GGTTCGGGCA AGACAACGAC CCTCTACTCA ACCCTGCGTA ACCTTTCGTC TCCGGAAGTG
AATATCGTTA CCATTGAAGA TCCGATCGAG ATGGTGATGG AGGAGTTTAA CCAGATTGCG
GTGCAACAGA GTATCGGCGT CACCTTCGGC AATATCCTGA GGACGGTCCT GCGGCAGGAC
CCGGATATCG TCATGGTTGG TGAGATCCGT GATGAAGAAA CTGCCGAGAA CGCAGTCCAG
GCGGCCCTGA CCGGCCATCT GGTGCTCTCC ACGTTGCATA CCAATGATGC CCCTTCGTCC
ATTGCCCGTT TGCTGGATCT GGGAGTGCCG CCCTATCTGA TTACGGCAAC GGTGGTCGGC
ATTATCGCGC AGCGTCTGTT GCGCAAGGTC TGTCCCCACT GCAAGGTTCC GCGCCAGCTG
TCTGCAGAGG AACGGACCTA TCTGCAATTG ACCGCCGAGT CTTACACCGT CTATGAGGGC
GAGGGGTGCA AGGGGTGTCG GGGCACTGGC TATAAAGGCC GCACCGGTAT CTTTGAAGTG
CTTGAGATGA ACGAGCGGAT CCGGGCCATG GTGGGAGACA AGGTTGATCT TGCAGAACTG
GTGCGTTCTG CCGAGCAGGA CGGTTTTCTG TCCCTGCGTC AACTTGCTAT TCGTAAGATG
TTGGAAGGGG CAACCACCTA CGATGAGGTA ATCTCAATTA CCGGTTGA
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| Protein sequence | MGTQSKLTIE YLTALLFEKK LLTGDQRAMV LAKAKAQEAR LTAGPQAGGR RLHRGGEAPS
PAQLLASFNL ETPGGNGRIL SEDAITEALA SFLNIPYLKI DPLKLDLDVV TSYIPRPFAL
KHLIVPVATR DGELAIAVVD PFNDQVLSEF ATAHRLKVRR VLSSCSDIQK ILREFYGFRA
SVLAAEAESS TTIDLGNLEQ LFKLKGEHEL EGNDRHVISA VDFLLSYAFD QRASDIHIEP
KREKCLIRFR LDGLLHNIHL LPKPLHAPIV SRIKILSRMD LAEKRRPQDG RIKTSHNNKE
VELRVSTVPT AFGEKVVIRI FDPDILFQEL DSIGFYTREY SLYNSFIHRP NGIILVTGPT
GSGKTTTLYS TLRNLSSPEV NIVTIEDPIE MVMEEFNQIA VQQSIGVTFG NILRTVLRQD
PDIVMVGEIR DEETAENAVQ AALTGHLVLS TLHTNDAPSS IARLLDLGVP PYLITATVVG
IIAQRLLRKV CPHCKVPRQL SAEERTYLQL TAESYTVYEG EGCKGCRGTG YKGRTGIFEV
LEMNERIRAM VGDKVDLAEL VRSAEQDGFL SLRQLAIRKM LEGATTYDEV ISITG
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