| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2353 |
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| Symbol | |
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| ID | 6368412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2531823 |
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| End bp | 2532761 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642677771 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001952589 |
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| Protein GI | 189425412 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGG AAGACGGTCA TGGCAGGGAA ACCGTCCCAC CGGGCGAGTG GAGGCGGTTG
CTACCCGAAT ATGTCGCTGC CGGTGCTCGC TATTCGGCAG TTTGGGCCGT GGTATTGGCA
TCCAAAGGGA TTCCGTACAG CCAGGAGACC GAACAGGGAC AGTGGCGGCT GCTGGTGCCT
GCTGAGCAGT TGTCTGCAGC CGTCCGGGAG ATATCGCTCT ACGAAGATGA AAACCGCAAT
TGGCCGCCCT TGCCGCCCCT GCGACCGGCA CTGGATAGCG GTACTTACAC CACTCTTTCA
ATCCTGATCC TGCTTGCAGC ATTCCATAAT CTTGTCCGTT CCGACTTGGT AACCGTTGCC
GGCAACTATC CGGACTGGTT CTCAAGCGGT ATGATGCAGT CAGGTAAAAT CATGGATGGT
GAATGGTGGC GGCTGGTTAC CTCCCTGACG CTGCATGCCG ACCTGTCGCA TCTCCTGGGT
AATCTCTGTA TTGGTGGCGT ATTTGTTGTG CTGCTCTGCC GGGAGATGGG TTCCGGTTTG
GCCTGGACCC TGCTGCTGGG GGCCGGTCTG CTCGGCAATC TTGTCAACGG GTATATCCAG
CCTGCTACGC ATAATTCGAT CGGTGCCTCC ACCGCCGTAT TCGGTGTGGT TGGTATTCTG
GCCGGTCTCA GTGTGCGGCG CTACAGCCAG CTGAAGAAAC GACGCTGGGC CGTGCCTGTG
GCTGCAGCGC TTTCGCTGCT TGTCCTGATA GGGAGTGAGG GGAAAAACAC CGATGTCGGT
GCCCATTTCT TCGGCCTTTT GGCAGGGCTG CTGCTGGGGC TGTTCACCGA GGTCCTGATT
GGCCGTTATG GCTATCCCGG CCGCTTTCTG AATGTGCTGC TGGCGGTATG CAGCTGTCTG
CTTGTCGTAA CCGCCTGGTG GTATGCCCTG CAGCTATAG
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| Protein sequence | MEMEDGHGRE TVPPGEWRRL LPEYVAAGAR YSAVWAVVLA SKGIPYSQET EQGQWRLLVP
AEQLSAAVRE ISLYEDENRN WPPLPPLRPA LDSGTYTTLS ILILLAAFHN LVRSDLVTVA
GNYPDWFSSG MMQSGKIMDG EWWRLVTSLT LHADLSHLLG NLCIGGVFVV LLCREMGSGL
AWTLLLGAGL LGNLVNGYIQ PATHNSIGAS TAVFGVVGIL AGLSVRRYSQ LKKRRWAVPV
AAALSLLVLI GSEGKNTDVG AHFFGLLAGL LLGLFTEVLI GRYGYPGRFL NVLLAVCSCL
LVVTAWWYAL QL
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