Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2249 |
Symbol | |
ID | 6366322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2399904 |
End bp | 2400881 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642677665 |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_001952485 |
Protein GI | 189425308 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATC AATCTGCCAA GCCGAAGTTG CTGGACCAGT TGCGTGATCG TATCAGGTTG AAACATTACA GCCGCCGGAC TGAGGATGTG TACCTTGACT GGGCAAAGCG TTACATACTG TATCACAATA AACGGCACCC GCAAGAGATG GGCAAGAAAG AAATTGAGGG GTTTTTAACG TACCTGGCGA CTGAGCGGCA GGTGGCGGCT GCCACCCAGA ATCAGGCCAA GGCAGCTCTG CAGTTTCTGT ATAAAGAGGT GCTTGAAATT CAGTTGCCCT GGCTGGATGA GGTGGAACAG GCCAAAAAGC CGAAGCGGTT GCCGGTGGTG CTGACCGAGA AAGAGGTGCA TTCTCTGCTG GCCCATGTGC CACAGGCCTA TGCTTTGTTG GCCCGTCTGA TGTACGGTAC CGGTATGCGT TTGCTGGAGG GGTTGCGGCT GCGTGTGCAG GATCTTGATT TTGAAAGAGC CGAGCTGCTG ATTCGGGAGG GTAAGGGGGG TAAAGACCGG GTGACCATGC TGCCACAGTC ATTGCTCAAG CCGTTGCAGG AACATCTGAA ACAGGTAAAG CAGGCGCATG AGCAGGATCT TTTAAAGGGG TACGGTGAGG TCTGGCTGTC TGAGAGTGTT GCCCGCAAGT ATCCCAATGC CGGGCGGGAG TGGGTCTGGC AGTATGTCTT TCCGTCTGCG CGGTTATCGG TTGATCCCCG TTCCGGTGTG ACCAGACGGC ATCATCTGGA TGAAAAGGGG CTGCAGCGGG CGATCAAGCA GGCTGCGGTT GATGCGGGGT TGACCAAGAA TGTGACGCCC CATACCCTGC GGCATTCTTT TGCGACCCAT CTGCTGCAGG CGGGGTATGA TATCCGTACC GTGCAGGAGT TGCTGGGACA CAAGGATGTG CAGACCACGA TGATTTATAC CCATGTGCTG AACAAGGGCG GGATGGGGGT GATGTCGCCG CTGGACCGGC TTGCCTAG
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Protein sequence | MQNQSAKPKL LDQLRDRIRL KHYSRRTEDV YLDWAKRYIL YHNKRHPQEM GKKEIEGFLT YLATERQVAA ATQNQAKAAL QFLYKEVLEI QLPWLDEVEQ AKKPKRLPVV LTEKEVHSLL AHVPQAYALL ARLMYGTGMR LLEGLRLRVQ DLDFERAELL IREGKGGKDR VTMLPQSLLK PLQEHLKQVK QAHEQDLLKG YGEVWLSESV ARKYPNAGRE WVWQYVFPSA RLSVDPRSGV TRRHHLDEKG LQRAIKQAAV DAGLTKNVTP HTLRHSFATH LLQAGYDIRT VQELLGHKDV QTTMIYTHVL NKGGMGVMSP LDRLA
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