Gene Glov_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_2249 
Symbol 
ID6366322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp2399904 
End bp2400881 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content56% 
IMG OID642677665 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_001952485 
Protein GI189425308 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02249] integron integrase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATC AATCTGCCAA GCCGAAGTTG CTGGACCAGT TGCGTGATCG TATCAGGTTG 
AAACATTACA GCCGCCGGAC TGAGGATGTG TACCTTGACT GGGCAAAGCG TTACATACTG
TATCACAATA AACGGCACCC GCAAGAGATG GGCAAGAAAG AAATTGAGGG GTTTTTAACG
TACCTGGCGA CTGAGCGGCA GGTGGCGGCT GCCACCCAGA ATCAGGCCAA GGCAGCTCTG
CAGTTTCTGT ATAAAGAGGT GCTTGAAATT CAGTTGCCCT GGCTGGATGA GGTGGAACAG
GCCAAAAAGC CGAAGCGGTT GCCGGTGGTG CTGACCGAGA AAGAGGTGCA TTCTCTGCTG
GCCCATGTGC CACAGGCCTA TGCTTTGTTG GCCCGTCTGA TGTACGGTAC CGGTATGCGT
TTGCTGGAGG GGTTGCGGCT GCGTGTGCAG GATCTTGATT TTGAAAGAGC CGAGCTGCTG
ATTCGGGAGG GTAAGGGGGG TAAAGACCGG GTGACCATGC TGCCACAGTC ATTGCTCAAG
CCGTTGCAGG AACATCTGAA ACAGGTAAAG CAGGCGCATG AGCAGGATCT TTTAAAGGGG
TACGGTGAGG TCTGGCTGTC TGAGAGTGTT GCCCGCAAGT ATCCCAATGC CGGGCGGGAG
TGGGTCTGGC AGTATGTCTT TCCGTCTGCG CGGTTATCGG TTGATCCCCG TTCCGGTGTG
ACCAGACGGC ATCATCTGGA TGAAAAGGGG CTGCAGCGGG CGATCAAGCA GGCTGCGGTT
GATGCGGGGT TGACCAAGAA TGTGACGCCC CATACCCTGC GGCATTCTTT TGCGACCCAT
CTGCTGCAGG CGGGGTATGA TATCCGTACC GTGCAGGAGT TGCTGGGACA CAAGGATGTG
CAGACCACGA TGATTTATAC CCATGTGCTG AACAAGGGCG GGATGGGGGT GATGTCGCCG
CTGGACCGGC TTGCCTAG
 
Protein sequence
MQNQSAKPKL LDQLRDRIRL KHYSRRTEDV YLDWAKRYIL YHNKRHPQEM GKKEIEGFLT 
YLATERQVAA ATQNQAKAAL QFLYKEVLEI QLPWLDEVEQ AKKPKRLPVV LTEKEVHSLL
AHVPQAYALL ARLMYGTGMR LLEGLRLRVQ DLDFERAELL IREGKGGKDR VTMLPQSLLK
PLQEHLKQVK QAHEQDLLKG YGEVWLSESV ARKYPNAGRE WVWQYVFPSA RLSVDPRSGV
TRRHHLDEKG LQRAIKQAAV DAGLTKNVTP HTLRHSFATH LLQAGYDIRT VQELLGHKDV
QTTMIYTHVL NKGGMGVMSP LDRLA