| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2233 |
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| Symbol | |
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| ID | 6367430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2382488 |
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| End bp | 2384542 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642677648 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001952469 |
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| Protein GI | 189425292 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000414929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCAA GAAAATACCC GATTTCCCAC GCTCTGACAT CGTTTAATCA TACCACGGTA
GCACCAGTGG AAGCTCCGGC CCCTATCAGT GTCAAGAGCC CCGCAAAAGT CCACCGTCTG
CCCTCTTCGA TCTGGAAGAA GATGGAGGGC AGCGCAGGCA ATCCTTTGGA TAAGGCCGTT
GAACTGACCC GCGACTTCTT TTTCCGGGAG CAATTGCCGG ATGGTTACTG GTGGGCAGAG
CTTGAATCAA ACGTCACCAT TACGGCAGAG TACATCATGC TGTTCCACTT CCTTGGCATG
GTTGACAAGG ACAAAGAGCG CAAGATGGCC AACTATCTGC TGCGCCAGCA GACTGAAGAA
GGCTACTGGA CGGTCTGGCA CAACGGACCG GGTGACCTTT CCACCACCAT TGAAGCCTAC
TTCGCCCTGA AGCTGGCCGG CTATCATGCT GATCACATTG CCCTGCGTAA AGCCCGCGAC
TTTATCCTGG CCAATGGCGG CATCCTGAAG TCACGGGTTT TCACCAAAAC GTTTCTGGCC
ATGTTCGGTG AGTTCTCCTG GCTGGGGGTT CCCTCCATGC CGATCGAGCT GATGCTGTTG
CCTGACTGGG CCTACCTGAA TGTCTATGAA TTCTCCAGCT GGGCCCGTGC CACCATCATC
CCGATGTCTG TGTTAATGGC CAATCGTCCG GTCTATAAAC TACCGCCCCA TGCACGGGTG
CAGGAGCTGT ACGTGCGTCC GCCCCGGCCC ACCGATTACA CCTTTACCAA GGAAGACGGC
ATCTTCTCCC TGAAGAACTT CTTTATCGGT GTAGATCACC TGCTCAAGAT CTACGAATCA
AGCCCGATCC GCCCTTTCAA GAAGCGGGCA ACCGAAAAGG TGGAACAATG GATACTTGAA
CACCAGGAGA AAACCGGTGA CTGGGGCGGC ATCCAGCCCG CCATGCTGAA CGCCATCCTG
GCGCTGCACT GCCTGGGCTA TGCCAATGAC CATCCGGCCG TGGCAAAAGG CTTGGAGGCC
CTGGCCAATT TTACGATTGA AGACAGTGAC TCCTTGGTGC TGCAATCATG CATCTCACCG
GTCTGGGATA CGGCACTGGT GCTGCAAGCC ATGCAGGAGG CCAGTGTTCC TTTGGATCAC
CCGTCTCTGA TCAAGGCGTC CCAGTGGCTG CTCGATCGTG AGGTACGGAT CAAGGGCGAC
TGGAAGATTA AATCACCTGA TCTGGAACCT GGCGGCTGGG CCTTTGAATT TCAGAACGAC
TGGTACCCCG ACGTGGACGA CTCGACAGCC GTGATGATCG CTATCAAGGA TATCAAAGTC
AAGAACACCA AAGCCCGTCA GGATGCCATC CGGCGCGGCA TTGACTGGTG TCTGGGGATG
CAGAGCGAAA ACGGCGGCTG GGCAGCCTTT GACAAAGACA ACACCAAGCA TATGCTGAAC
AAGATCCCGT TTGCTGATCT GGAGGCATTG ATCGACCCCC CTACTGCTGA TCTGACCGGG
AGGATGCTGG AGCTGATGGG CAATTTTGGC TACACCAAAG ACCATCCCCA GGCAGTCAGC
GCCCTGGAGT TTCTAAAAAA CGAACAGGAG CCGGAGGGCC CCTGGTTCGG CAGATGGGGC
GTCAACTACA TTTACGGCAC GTGGTATGTG TTGATCGGGC TGGAGGCGAT CGGCGAGGAC
ATGAACAGCC CCTATATCAA GAAGTCGGTC AACTGGATCA AGTCCCGGCA GAACCTGGAT
GGAGGTTGGG GTGAAGTCTG TGATTCCTAC TGGGACCGCA CCCTGATGGG CTGCGGCCCC
AGCACCGCCT CCCAGACATC CTGGGCCCTG ATGGCCCTGA TGGCCGCCGG TGAGGTCGGC
TGCCAGGCGG TTGAGCGGGG GATTCAGTAT CTACTGGCCA CCCAGAACAG TGACGGCACC
TGGGATGAAG AGGCATTTAC CGGCACCGGT TTCCCCAAGT ATTTCATGAT CAAGTACCAT
ATTTATCGCA ACTGCTTCCC GCTGACCGCC TTGGGCAGAT ATCGCCGGCT GACGGCGGGG
ACGCACGCAC AGTAA
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| Protein sequence | MKSRKYPISH ALTSFNHTTV APVEAPAPIS VKSPAKVHRL PSSIWKKMEG SAGNPLDKAV
ELTRDFFFRE QLPDGYWWAE LESNVTITAE YIMLFHFLGM VDKDKERKMA NYLLRQQTEE
GYWTVWHNGP GDLSTTIEAY FALKLAGYHA DHIALRKARD FILANGGILK SRVFTKTFLA
MFGEFSWLGV PSMPIELMLL PDWAYLNVYE FSSWARATII PMSVLMANRP VYKLPPHARV
QELYVRPPRP TDYTFTKEDG IFSLKNFFIG VDHLLKIYES SPIRPFKKRA TEKVEQWILE
HQEKTGDWGG IQPAMLNAIL ALHCLGYAND HPAVAKGLEA LANFTIEDSD SLVLQSCISP
VWDTALVLQA MQEASVPLDH PSLIKASQWL LDREVRIKGD WKIKSPDLEP GGWAFEFQND
WYPDVDDSTA VMIAIKDIKV KNTKARQDAI RRGIDWCLGM QSENGGWAAF DKDNTKHMLN
KIPFADLEAL IDPPTADLTG RMLELMGNFG YTKDHPQAVS ALEFLKNEQE PEGPWFGRWG
VNYIYGTWYV LIGLEAIGED MNSPYIKKSV NWIKSRQNLD GGWGEVCDSY WDRTLMGCGP
STASQTSWAL MALMAAGEVG CQAVERGIQY LLATQNSDGT WDEEAFTGTG FPKYFMIKYH
IYRNCFPLTA LGRYRRLTAG THAQ
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