Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2213 |
Symbol | sdhA |
ID | 6368664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2361706 |
End bp | 2363622 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642677627 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001952449 |
Protein GI | 189425272 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00041911 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACTCG ATGGTAAATG TCCAACCGGA CCAATTCAAC AGAGCTGGGA CAAACACCGC TTCGATCTGA AGCTGGTTAA CCCCGCCAAC AAGCGTAAAT ACAACATCAT CATGGTTGGT ACCGGCCTGG CCGGTGGCGC TGCCGCAGCC TCTCTCGGAG AGCTCGGCTA CAACGTACAG GCTTTCTGCT ATCAGGACAG CCCCCGTCGC GCGCACTCGA TTGCTGCACA GGGTGGTATC AACGCTGCTA AAGCTTATCC GAACGACGGT GACTCGATCT ATCGTCTGTT CTATGACACC ATCAAGGGTG GCGACTTCCG TGCCCGTGAA GCGGACGTCT GGCGTCTTGC CCAGGTCTCC AATAACATCA TTGACCAGTG CGTAGCCCAG GGTGTTCCGT TTGCCCGTGA CTATGCCGGC TATCTGGATA ACCGTTCCTT CGGTGGCGCC CAGGTTTCCC GTACGTTCTA CGCTCGTGGT CAGACCGGCC AGCAGCTGCT GCTGGGTGCC TACTCTGCCC TGGCACGTCA GATCAAGGCC GGTACCGTAA AGATGTACAC CCGCCGTGAA ATGCTTGACC TGGTGGTTAT TGACGGTGTT GCCAAAGGGA TCACCGTTCG CAACCTGGTT ACCGGTGAGA TCGAGAGCTA TGCTGCTGAC GCAGTCTGTC TTGCAACCGG TGGCTATGTG AACGTGTTCT ACCTCTCGAC CAACGCCATG GGCTGCTCCG TAACGGCAAA CTGGGCTGCC CACAAGAAGG GTGCTTTCTT TGCCAACCCT TGCTACACCC AGATTCACCC GACCTGTATT CCACAAGCCG GTGATTATCA GTCCAAGCTG ACCCTGATGT CCGAGTCCTT GCGGAACGAT GGCCGCTGCT GGGTGCCCAA GAAGAAGGAA GATTGCGGCA AGCACCCCAA CGAGATTGCT GAAGACGACC GTGACTACTA CCTGGAGCGC AAATACCCCT CCTTCGGTAA CCTTGCCCCC CGTGATATCG CCTCCCGTGC TGCCAAAGAG CAGTGTGATG ATGCCCGCGG TGTTGGACCG GGTGGCCGCG GTGTCTACCT TGACTTCTCC ACTGCCATCA AGCGGGTAGG TGCTGATACC ATCAAGGAGC GTTACGGCAA CCTGTTCGAA ATGTACGAGA AGATCACCGA TGAGGATGGC TACAAGCGCC CAATGCGTAT GTATCCTGCC CCCCACTACT CAATGGGTGG CCTCTGGGTT GATTATAACC TGATGAGCAA CATCCCCGGT CTGTTTGTAC TTGGTGAGGC TAACTTCTCG GTACACGGTG CAAACCGTCT GGGTGCTTCA GCCCTGATGC AAGGTCTGGC TGACGGCTAC TTCGTCATTC CATACACCAT CGGCGGCTAT CTGGCCGGCG TGAAGCCTTC CGGTACCTCT ACTGACAATC CCGAGTTCAA GAAGTCCGTT GATGAAATCA AGGCTTACGG CAATAAGTTG CTCAACGTAA ACGGCAAGAA GACCGTTTCA GAGTTTATGC GTGAGCTGGG TGGACTGATG TGGGAAAACT GCGGTATGGC CCGTTCCGAT GCCTCACTGA AGATCAACCT GGAGAAGATT CCCGCCCTGC GCGAAGAGTT CTGGAAGAAC GTCAAGGTTA CCGGTACCGG TGCCGAGTTT AACCAGGATC TTGAAAATGC CGGACGTACC GCAGACTTCC TTGAATTTGC AGAGCTTATG TGCCGTGACG CCCTGCATCG CAACGAATCC TGTGGTGGTC ACTTCCGGAC CGAGTATCAG ACAGACGACG GCGAGGCACA ACGTGATGAC GCCAACTTCT GTTATGCAGG CGCCTGGGAG TTCAAGGGTA TCAACAACGA GCCTGAACTG CACAAGGAGC CCCTCAAATT CGAGAACGTC CATCTCGCCG TAAGGAGCTA CAAATAA
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Protein sequence | MILDGKCPTG PIQQSWDKHR FDLKLVNPAN KRKYNIIMVG TGLAGGAAAA SLGELGYNVQ AFCYQDSPRR AHSIAAQGGI NAAKAYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFYARG QTGQQLLLGA YSALARQIKA GTVKMYTRRE MLDLVVIDGV AKGITVRNLV TGEIESYAAD AVCLATGGYV NVFYLSTNAM GCSVTANWAA HKKGAFFANP CYTQIHPTCI PQAGDYQSKL TLMSESLRND GRCWVPKKKE DCGKHPNEIA EDDRDYYLER KYPSFGNLAP RDIASRAAKE QCDDARGVGP GGRGVYLDFS TAIKRVGADT IKERYGNLFE MYEKITDEDG YKRPMRMYPA PHYSMGGLWV DYNLMSNIPG LFVLGEANFS VHGANRLGAS ALMQGLADGY FVIPYTIGGY LAGVKPSGTS TDNPEFKKSV DEIKAYGNKL LNVNGKKTVS EFMRELGGLM WENCGMARSD ASLKINLEKI PALREEFWKN VKVTGTGAEF NQDLENAGRT ADFLEFAELM CRDALHRNES CGGHFRTEYQ TDDGEAQRDD ANFCYAGAWE FKGINNEPEL HKEPLKFENV HLAVRSYK
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