| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2194 |
|---|
| Symbol | |
|---|
| ID | 6368147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2339704 |
|---|
| End bp | 2340450 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642677608 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001952430 |
|---|
| Protein GI | 189425253 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.440824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGG AATTTGAACA TAACGTTGTC GTGGTTACCG GTGGTACCCG GGGCATTGGC
CGGGCAGTAT CCCTGCGCTT TGCCGCAGCA GGTGCCACCG TCTTTGCCGC CTACCTGAAC
AATGATGAGG CTGCGGACAG GCTGCGTCTG GATGCAGCAG AGCTGGCAGG CAGTATCACC
ACCATCAAGG CTGATGTTGC TACTTCCAGC GGGGCAACCA GCCTGATTGA TGCTGCCACT
GCAGCAAGCG GGTATCTTGA TGTCCTGGTC AACAATGCCG GGATTATCCG CGATGGTTTT
CTGGCCATGA TGGCTGAAGA TGACTGGGAT GCGGTGCTGC GTACCAATCT GTCCCCCCTG
TTCCACTGCT GCAAGTGGGG TGCCCGTAAG ATGCTGGCCC GCCGCAGTGG AGCCATTATC
AATGTCTCTT CAATCTCCGG CATCAGCGGC GCTGCCGGGC AGACCAACTA TGCTGCCACA
AAAGGGGCTG CCATCAGTTT TACCAAATCC CTTGCCCGTG AGCTGGGGCC GATGGGGATT
CGGGTCAATG CTGTTGCAGC CGGACTGATT GAAACGGACA TGACCGCCGG TTTGAAACAG
GATCAGGTGG AGCGGATTGT GAAATCATCT GCCCTGGGGA GGATCGGCCA GCCGGACGAG
ATTGCTGATG CAATCGCATT TCTGGCCTCA TCCAAAGCTG CCTACATCAC CGGGCAATGT
CTGGTGGTTG ATGGAGGCAT TCTGTGA
|
|---|
| Protein sequence | MGLEFEHNVV VVTGGTRGIG RAVSLRFAAA GATVFAAYLN NDEAADRLRL DAAELAGSIT
TIKADVATSS GATSLIDAAT AASGYLDVLV NNAGIIRDGF LAMMAEDDWD AVLRTNLSPL
FHCCKWGARK MLARRSGAII NVSSISGISG AAGQTNYAAT KGAAISFTKS LARELGPMGI
RVNAVAAGLI ETDMTAGLKQ DQVERIVKSS ALGRIGQPDE IADAIAFLAS SKAAYITGQC
LVVDGGIL
|
|---|
| |