| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2159 |
|---|
| Symbol | |
|---|
| ID | 6367027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2308491 |
|---|
| End bp | 2309987 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642677572 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001952395 |
|---|
| Protein GI | 189425218 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACGG TCCGGTTAAG CCTCACGTTT TCCATTCTTG CCTCACTGGC CTGCCTGCTG
GTGCTTACCT GGCTGCTCTT CAGCCTGCTT GCCTTCAAAA CCGCTGAAAA TGACCTGTAC
GCCCAGAAGG GCGAACATGC CCGGATGCTG CTGGCCACCT TTGTCAACCA GCTGCCTGAA
CAGCTGCCCA GTTTCCCGGA AGGCATGCTG CCGCTGGATG CTCCGGCAAC GCTCTATGCC
GCCAAGCTTT CTGAAGAACG TTCATTTGAG CGCCTGACCC TTTTAGACAG GTCGGGCAAG
GTTATTTACA GTGTTGGCAG AGAAGGCAGT GATCTGTATC GCCCGTTCAG CCTGCCGGGG
CGTCAGGTGG AAGAAAGCAG GATCATAGCA GACGGCGCAG CGCTGGTCCG TTCAATGCAG
GTCATCCGCA ATGGCCAACA GGTTGGCAGG GCCGGTCTGA TTCTCTCCTT GCAGGATGAA
CAGCGACGCA TTCAGCGCAC CAGACAGCTG CTGCTGACCT ATTTTGCCCT TGATTTTATC
CTGTTGCTCG GGCTTGGGGC CTTTATTCTG TCCAGGATTG TGGTGGCGCC GGTTAACCGC
CTGCTTTCAG CCACGGAGAA GATCACCGGT GGTGTCTACG GGCATCAGCT GACGGTCACC
GGTGCGCTGG AACTGGCCCG GCTGGCAGAG TCGTTTAACG CCATGTCCAG CACACTGGAG
CAAAAGCAGC AGGAGGTCAC CTCCCATGTT GCCGCCCTTG AACAGGTCAA CCGGGATCTG
CAGCAGGCAC GGGAAGAGGC GATCCGTTCA GAAAAAATGG CATCGGTGGG GCTGCTGGCC
GCCGGTACTG CCCATGAAAT AGGCACACCG CTGGCCTCTG TAATGGGCTA CGCAGAGATT
CTGGCCCAAG AACTGGAGCA TAACCCGGCC CATGCTGACT ACCTCGCCAG GATTATGGAT
AGCTGCGGCC GGATTGACCG GATCGTAAAG GGGCTGCTTG AGTATGCCCG TCCAAAACAG
ACCGTTCATG AACCGGTTGA CCTTTCTCTG CTCATGCAGG CCACAGTTGA GCTGCTGCAA
CATCAGGGCT TTTTCAAGGG GATAAAGCTG ACCATGACCA CGGAACCTGC CTCCTCGCTG
GCCAGCCTTG ACCCGCACCA GCTGCAGCAG GTGCTGATCA ACCTGCTGAT CAATGCCAGT
GATGCCATGC CGCAGGGCGG TGAAATCAAA CTGGCACTCA AGCAGGGCGC TGATAAAAAG
ATACTGCTGC TGGAGGTCTG GGATACGGGG ACGGGAATAG CACCAGAGCA TCTTGGCAAG
CTGTTTGACC CGTTCTTTAC CACCAAGAGC CCGGGAAAAG GGACCGGTCT GGGGCTTGCA
ATTTCAGCCC GCATCATTGA GAGCTTTGGT GGCCGGATTA CGGTGCAGAG CAGGGTCGGG
CTGGGCAGCC GCTTCACTAT CCATGTACCG GTCTATACGA AGGGTCAGGT GGTATGA
|
|---|
| Protein sequence | MRTVRLSLTF SILASLACLL VLTWLLFSLL AFKTAENDLY AQKGEHARML LATFVNQLPE
QLPSFPEGML PLDAPATLYA AKLSEERSFE RLTLLDRSGK VIYSVGREGS DLYRPFSLPG
RQVEESRIIA DGAALVRSMQ VIRNGQQVGR AGLILSLQDE QRRIQRTRQL LLTYFALDFI
LLLGLGAFIL SRIVVAPVNR LLSATEKITG GVYGHQLTVT GALELARLAE SFNAMSSTLE
QKQQEVTSHV AALEQVNRDL QQAREEAIRS EKMASVGLLA AGTAHEIGTP LASVMGYAEI
LAQELEHNPA HADYLARIMD SCGRIDRIVK GLLEYARPKQ TVHEPVDLSL LMQATVELLQ
HQGFFKGIKL TMTTEPASSL ASLDPHQLQQ VLINLLINAS DAMPQGGEIK LALKQGADKK
ILLLEVWDTG TGIAPEHLGK LFDPFFTTKS PGKGTGLGLA ISARIIESFG GRITVQSRVG
LGSRFTIHVP VYTKGQVV
|
|---|
| |