| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2100 |
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| Symbol | |
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| ID | 6368798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2238961 |
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| End bp | 2242209 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642677513 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001952336 |
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| Protein GI | 189425159 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.758651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTGA ACATCCTGCA TGTTACCGCT ATTGCAGCCG CCTATACCGG ACTGCTGTTT
CTGGTGGCCT GGTATGCACG CAGACGCTTT GAACAGGGCC GTAGTCTGGT CAACAACCCC
TATGTCTACA GCCTCTCCAT AGCGGTCTAT TGTACATCCT GGACGTTCTA CGGCAGCGTC
GGCAAAGCTG CCACCAGCGG AATCGACTTT TTGATGATCT ACCTTGGGCC ATCGCTGGTC
GCTTTTTCCT GGTTCTTTAT CCTGCGACGC ATTATCAGGA TCAGCAAAGA AAACAATGTC
TCCTCCATTG CCGATTTCAT CAGTCTGCGG TATGGCAGCT CCCAGTTGCT TGGTTCCCTG
ATCACCCTGA TAGCAGTACT GGGGATCATG CCGTATATTG CTTTGCAAAT AAAGGCGGTG
GTAACCTCCT TTGCACTGGT CAGCGGAGTT ACTGAGCGAA CTATCACCCT GCCCGGTGCG
GATTCATCCG TAATACTCCC CACCGGTTTA ACGCTGGCAG TCATACTCTC GATTTTCGGT
GTGATCTTCG GTGCCCGGCG CCTCCCCTCA ACTGAACGTC ATGAAGGATT GATTGCCGCC
GTCGCATTTG AGTCGGTGGT AAAGCTGGTC AGCCTGGTCG GGGTGGGAGT CTTTGTCACC
TGGTATCTGT TTGACGGTTT TGAAGACATT TTATTCCGTT TTCACACCCA GTATCCGCTG
TTGTTTGAAC GCTTGTTTAC CCTCAATACG ACACAAGGCA ACGATGTCAT CCCTTCTTCA
ACCATGTTGT TCCTGTCCAT GGGGGCGATC ATCCTGCTAC CGCGTCAGTT CCATGTGCTT
GTCATAGAAA ATGCTGATTT AAGACATATC AGCAAGGCAA TGTGGCTCTT TCCCACCTAC
CTGTTCCTGA TCAACCTGTT TATCATGCCG ATCGCCCTGG GTGGTATCCT GCAAAGCGGC
AGCAATATAG GTGCGGACTA TTTTGTAATC AGTGTGCCTC TGGCCGCAGG GAATGAATCA
ATGGCACTAC TGGCCTTCCT GGGGGGGCTG TCTGCTGCGG CCGGTATGGT CATGGTTGAA
TCCGTAGCCA TTTCCACCAT GCTGCTCAAC AACCTGTTCA TGCCGGTCAT TGTCAGGATC
ACTCCCAAGC AATGGTTTCC ACTGCTGCTG ATCAACCTGA AGCGGGTAGC GATCTTTCTG
GTGGTTTTTT TAGGTTACTT CTACTATCAG GCAGTTGGTG ACTCCTTCAT GCTGGTCAAT
ATGGGACTAA TCTCGTTTTT GGCGGCAATG CAGTTTTTGC CGGCCTTGCT GGGGGGATTA
TACTGGCCAA AAGGGAATAA AATAGGTGCC ATATCCGGTA TGGCGCTGGG CTTTATCATC
TGGTCTTACA CCCTGTTGAT CCCGTCTTTC TTCGCTGCCG TACCGGACAG CCCGATTATG
CGGGATGGCC TGTTCGGCCA GGCACTGCTG AAACCCACGG CCCTGTTTGG CCTGACCGGC
ATGGATATGT GGAGTCATGC GCTGTTCTGG AGCATGCTGT TCAATGTGGG CGCCTATCTG
GTCTGTTCGC TGCTTATCTC GCAAAGTGAC CTTGAAAAGG AGCAGGTCCG CCGTTTCATC
GGCAAGTTTG AAACTGAACG GCGCCAGGTC AAAAGTGCTG CCAAACGCCT TTCAAAACCG
GTTACCATCC CGCAGTTCAT CGGTCTGATG GGTAAATTTA TCGGACCCGA AGAGGCCTCA
CAGGCTATGA CCAGCTACCT GAAGGGACGG ATGATCGACG AGGAAATCAT GGTTCCCGAA
TTTGAGCTGC CGGCCATGAA ACGCTTTGTC GAGCGGACCC TGGCCGCTTC AGTGGGAGCG
GCAGCAGCAG GCGCCATCAT GGACAGTTAT CTGTCCGATA TGGGTAGCCG GATGGAGTCG
GTCTACGATA TTTTCAGCAC CGTCAGGGCC TCCCTTGACC AGAGCCGTGA AGCATTATAT
GTCCGCCTCA AGGCCTCTGA GATCATCAAC CGCACCCTTG ACCTGCAGAC AATCATGGAT
GAACTGCTGC AATTGCTGCT CAAGGAGTTC AGGCTTGACG TCGCCCTGAT CCAGATCCGC
ACCAGCAGTG ACGTGCCGCT GTCTGTGCAG AGCTACCAGG GCTGTGACCG CCGCCCCATC
AATCCTGAAC ACTGGTATCT GGAGAGTGAC CCCTACATCA AGATGGCAAT GATCGACCAG
ACCACCCACT TCGTCAATGA CATCAAAAAC CTGCAAGCGA TCATCGATCT CTCGAAGACG
ACATCTGAAG GTTTCGTCTC ATTTGCGCAT ATTCCGATCT ATCGCGAGGG TGAAGAGAGC
CTGGGTGTGT TGTCGGTGTA CTCAAAATCC ATTATCGGTC TCTTTACGGA AGAATTTGTC
GGCCTGCTGA CCAGTCTGAC CGGCCAGCTT GCGCAGGCTG CCCGCCTGGC CAGTGAAATG
CAGGCCAAAG AGCGGGAGCG CCGGGAAAAG GAACAGGCCT TGCTGGCCAA TGCACGGGTC
AAGCGCGATA TGGAGATTGC GGAACAGATC CAGCTTTCAC TGTTGCCTGC CTCCCCGCCG
GTTCTATTCG GGATTGAACT TGCCGGACGT TGCTATCCAG CAGCCCATGT CGGTGGTGAT
TACTATGATT TTTTCAAACG TGATGATCAC ACCATTGATC TTCTGATCGC CGATGTTTCC
GGCCATAGTG TTGGGGCAGC CCTGATCATG GCTGAGGTGC GCACCCTGTT GCGCGCCCAT
TCCAGCCGGG CAGTCAGTCC CAGCAGCATC CTGGGTGTCC TTAACAGCCA ACTCTACGAA
GATCTGACCA GAGCGGAACT GTTCATCACC ATGTTCTACG CCCGCTACAG CGCAGCCACC
GGCCGCCTGT CCTATGCCAA CGCCGGGCAT AACAAACCGC TGATACACCG CCAGGGTGAG
CAGAGTTGCA TAGAGCTTGA TGCAGAGGGA TTGATTCTCG GTATCAAACC ATCCATGATC
TTTGAAGAGC GCTCCATAAA TCTGCAGCAA GGCGACACGC TGCTCTTTTA TACCGACGGC
ATTCCCGAGG CGACCAACCG CACCGGAGAA CTGTTGGGAA CCGGCCAGGT CTGTCAACAC
CTCACTCTGC AGAGCACCTT ACCGGTGGAC ACAATTGCCG ACTCGTTCTT TGAGCTGGTT
AAAGAGTACA GTCAGAGTAC AACCCTTCAG GATGATGTCT CAATGGTAGT TATGAAAATT
GTCGCCTAA
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| Protein sequence | MTLNILHVTA IAAAYTGLLF LVAWYARRRF EQGRSLVNNP YVYSLSIAVY CTSWTFYGSV
GKAATSGIDF LMIYLGPSLV AFSWFFILRR IIRISKENNV SSIADFISLR YGSSQLLGSL
ITLIAVLGIM PYIALQIKAV VTSFALVSGV TERTITLPGA DSSVILPTGL TLAVILSIFG
VIFGARRLPS TERHEGLIAA VAFESVVKLV SLVGVGVFVT WYLFDGFEDI LFRFHTQYPL
LFERLFTLNT TQGNDVIPSS TMLFLSMGAI ILLPRQFHVL VIENADLRHI SKAMWLFPTY
LFLINLFIMP IALGGILQSG SNIGADYFVI SVPLAAGNES MALLAFLGGL SAAAGMVMVE
SVAISTMLLN NLFMPVIVRI TPKQWFPLLL INLKRVAIFL VVFLGYFYYQ AVGDSFMLVN
MGLISFLAAM QFLPALLGGL YWPKGNKIGA ISGMALGFII WSYTLLIPSF FAAVPDSPIM
RDGLFGQALL KPTALFGLTG MDMWSHALFW SMLFNVGAYL VCSLLISQSD LEKEQVRRFI
GKFETERRQV KSAAKRLSKP VTIPQFIGLM GKFIGPEEAS QAMTSYLKGR MIDEEIMVPE
FELPAMKRFV ERTLAASVGA AAAGAIMDSY LSDMGSRMES VYDIFSTVRA SLDQSREALY
VRLKASEIIN RTLDLQTIMD ELLQLLLKEF RLDVALIQIR TSSDVPLSVQ SYQGCDRRPI
NPEHWYLESD PYIKMAMIDQ TTHFVNDIKN LQAIIDLSKT TSEGFVSFAH IPIYREGEES
LGVLSVYSKS IIGLFTEEFV GLLTSLTGQL AQAARLASEM QAKERERREK EQALLANARV
KRDMEIAEQI QLSLLPASPP VLFGIELAGR CYPAAHVGGD YYDFFKRDDH TIDLLIADVS
GHSVGAALIM AEVRTLLRAH SSRAVSPSSI LGVLNSQLYE DLTRAELFIT MFYARYSAAT
GRLSYANAGH NKPLIHRQGE QSCIELDAEG LILGIKPSMI FEERSINLQQ GDTLLFYTDG
IPEATNRTGE LLGTGQVCQH LTLQSTLPVD TIADSFFELV KEYSQSTTLQ DDVSMVVMKI
VA
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