| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2073 |
|---|
| Symbol | |
|---|
| ID | 6366982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2208027 |
|---|
| End bp | 2209256 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642677486 |
|---|
| Product | RNA-directed DNA polymerase (reverse transcriptase) |
|---|
| Protein accession | YP_001952309 |
|---|
| Protein GI | 189425132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00719283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCAG TCTATTCTCC CAATCTGCCG GTGTCTGTCC GGTTTTCTGC CTGCCATGCT
GCCTGGCTAC AGGCCAGGCG CGGCAAAAAG CCCAGCGCCA ATCAACTTTT GTTTGAGGCA
CGTTGGCTGG ATAACCTGCA CCAGTTGTAC AGCAGCCTGC GTGCTGGCTG CTGGCAGCCA
GCCCCCACTG TTTGTTTTAC CGTAACTCAC CCCAAGACCC GTGAGATACA TGCGCCGGCG
TTTGCCGACC GGATTGTCCA CCACCTGCTG GTGGATCGGC TTCAGCGCCT GTATGAACCG
GTATTTGTAT ACGATAGCTA TGCTAACCGC ACTGCTAAGG GTAGCCACGC AGCGGTTGAT
CGTCTGCAGC AGATGATCCG CCGCAGAAAC GGACAGGGCT GGTATCTGCA ACTGGATATC
CATAACTATT TTAACAGCAT CCATCGCCCT ACCTTATATG CCCTGCTGTG CCGCCGTCTT
GATCTGGCCT TGCAGAAAGG AAAGCTGGCA GATAGCCAGA GACTGGCGTT ACGCAGCCTG
TGTCATAAGT TACTTGCCCG TAAAAGCCGA GAAATTGAAC GGCCTGGGGC TGCGCCATCT
TCTGTGCCGC CCCACAAACG GCTTCGTAAC GCCCGACCCC AGTGCGGTTT GCCGGTGGGT
AATCTTACCA GCCAGTTTTT TGCCAATGTC TATCTGAATG AGCTGGATCA ATTCATCAAG
CATCAACTAA AGGTGCGGAA TTATCTGCGC TATGTGGATG ATTTTGTGCT GTTGGCAGAC
AGTAAAGAGC AGTTGCGTAC ATGGCAGGCA GAGATAGCTG CTTTTCTTGA AACCAGACTG
CAGCTGCGCC TGAAAGATGC CGTGGTGCTG GCGCCGTTAC ATCATGGGGT GGATTTTCTG
GGGTATCGGG TCTACTGCGG CCATCGCCTT GTGCGCCCCA GGGTAGTAAA GCACTGCTGC
AAGAAGCTTT CAGGTTGGTG GCAACAGTAT GGCCAAGCTG CCCAGATGGT CAGCACAGAG
TCTTTCAGCA AATTGCAAGC GCTGCTGGGC AGCTATTGGG GGCATTTCTG CCATGCCAAT
AGTGTGCGTC TTCGCCATGC ACTGTTTAAG CGATTTAACT GGCTGCACAA TTTTTTTCAG
TTACATGCTG ATGCTGGCCT TGTTGTAAAA CAACCGGCGC GTCACAAGCT TGCACGCCGC
CGTAACGCAA TGAAGATAGT TTACACCTAA
|
|---|
| Protein sequence | MKAVYSPNLP VSVRFSACHA AWLQARRGKK PSANQLLFEA RWLDNLHQLY SSLRAGCWQP
APTVCFTVTH PKTREIHAPA FADRIVHHLL VDRLQRLYEP VFVYDSYANR TAKGSHAAVD
RLQQMIRRRN GQGWYLQLDI HNYFNSIHRP TLYALLCRRL DLALQKGKLA DSQRLALRSL
CHKLLARKSR EIERPGAAPS SVPPHKRLRN ARPQCGLPVG NLTSQFFANV YLNELDQFIK
HQLKVRNYLR YVDDFVLLAD SKEQLRTWQA EIAAFLETRL QLRLKDAVVL APLHHGVDFL
GYRVYCGHRL VRPRVVKHCC KKLSGWWQQY GQAAQMVSTE SFSKLQALLG SYWGHFCHAN
SVRLRHALFK RFNWLHNFFQ LHADAGLVVK QPARHKLARR RNAMKIVYT
|
|---|
| |