| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2065 |
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| Symbol | |
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| ID | 6368590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2199290 |
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| End bp | 2200963 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642677478 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001952301 |
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| Protein GI | 189425124 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.461266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACA ACGACAATTG CGAACAACTG AAATATTTCA GTCATATTAT GGACTCCGTG
GCAGATGGTG TCTTCACCGT AGACCGTGAT ATGCATGTCA TTGCCTTTAA CCGCGCTGCA
GAGCTGATGA CCGGCATTAA GAGAGCAGAT GCGGTTGGGC GCCCCTGTCA CGAGATTTTC
CGCACCTCGG TCTGTGACAA TGGTTGTCCG GTACGGGAAG CAATGAAGAA GGGCAAACCG
GTTACCAACC GTGAAGTAAC CATTAAAAAT GCAGAAGATA AGTTGATTCC GGTTTCAGTC
AGCGCCTCCA TTCTCTATGA CGATGAAGGC AACCCGATTG GCGGGGTTGA GACTCTGCGC
AGCATGAAGC GTATCTACGC GATTATGGAC AGCGTTGCCG ATGGCCTCTT TACGGTTGAC
GAAGGGATGC ACATCACTCA CTTTAACAAG GCTGCCGAAG AAATTACCGG GGTTTCCGCT
CAGGAAGCGA TCGGCAGGCC CTGCTATGAA ATCTTTAAAT CCGAAGCCTG CACCGGTGCC
TGCCCGATGG TTGAAGCCAT TGCCACCGGC CAATCCATCC AACGGGAAGT GGAAATCAGT
GATCGCAAAG GGCGTAAGAA GCTGATCTCA GTCAGCGCAT CTACCCTCTA TGATGCAGCC
GGCAATGTCA TGGGCGGAGT GGAAACCGTC CGCGACCTGA CACCGATTAC TGCAATTAAA
GAAGAAATTC GTGAAAAATA CTCGTTCCGC AGCCTGGTGA GCCGTAACCC TGCCATGCGG
CGCCTGTTTG ACGTCATGGA AGATATCGCT GCCAGCAATG CAACCGTCTT CCTGAACGGT
GAAAGCGGCA CCGGGAAAGA GCTATTTGCC AGGGCTATCC ACGATTTAAG CCCCCGCCGC
GAAGGTCCGA TGGTAATCGT CAACTGTGGC GCCTTGCCGG AAACCCTGCT TGAGTCAGAG
ATCTTCGGTG TCCGCAAAGG AGCCTTTACC GGTGCAACAG AAAACCGCCC CGGGCGGCTT
GAACTGTGTA ACGGCGGCAC ATTCTTCCTG GATGAAATCG GTGACCTGCC ATTGCCGCTG
CAGGTAAAAC TGCTGCGTGT CCTGGAAAAC CATGAGTTCC AGCCACTTGG CGCCCGTTCT
CCCATCAAGG CCGATGTCCG CTTCATCACC GCAACCCACC GTAATCTTGA AGAGATGGTG
GCGGAAGGCA CCTTCCGTCA GGATCTCTAC TTCAGAATCA ATATTGTTAC CCTCAACATC
CCTCCCCTGC GTGACCGTCG CGAGGATATC CCCCTGCTTG TTGATATGGC TCTGCAACGT
TTCAACCTCA CCTACAATAA AAAAGTCCGC TCTGTTTCAC CTGAAGTCTT GAAGCTGTTG
CTTACCCACT CCTTTCCCGG CAACGTCAGA GAACTCTTGA ATCTGATCGA ACAGTCAGTC
ATACTCTGCC GCGGAACAGA GATCACTCTG GATCACCTGC CAACTAACTT TCTGGGGCAA
TCCCACGAGC AGGCGCAGAA CACGCGTCGT TCCGGCAAGA TTCCGACCGC CGCAGATCTG
AATGCCCTGT TAAGCCGCTA TAGCGGCAAT CGGGCCGAAG TTGCACGGGA GCTGAATATC
GACCGTACAA CCCTTTGGCG TTGGATGAAA AGGCTTGGTG TGAAGGAGTT TTAA
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| Protein sequence | MADNDNCEQL KYFSHIMDSV ADGVFTVDRD MHVIAFNRAA ELMTGIKRAD AVGRPCHEIF
RTSVCDNGCP VREAMKKGKP VTNREVTIKN AEDKLIPVSV SASILYDDEG NPIGGVETLR
SMKRIYAIMD SVADGLFTVD EGMHITHFNK AAEEITGVSA QEAIGRPCYE IFKSEACTGA
CPMVEAIATG QSIQREVEIS DRKGRKKLIS VSASTLYDAA GNVMGGVETV RDLTPITAIK
EEIREKYSFR SLVSRNPAMR RLFDVMEDIA ASNATVFLNG ESGTGKELFA RAIHDLSPRR
EGPMVIVNCG ALPETLLESE IFGVRKGAFT GATENRPGRL ELCNGGTFFL DEIGDLPLPL
QVKLLRVLEN HEFQPLGARS PIKADVRFIT ATHRNLEEMV AEGTFRQDLY FRINIVTLNI
PPLRDRREDI PLLVDMALQR FNLTYNKKVR SVSPEVLKLL LTHSFPGNVR ELLNLIEQSV
ILCRGTEITL DHLPTNFLGQ SHEQAQNTRR SGKIPTAADL NALLSRYSGN RAEVARELNI
DRTTLWRWMK RLGVKEF
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