| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2056 |
|---|
| Symbol | |
|---|
| ID | 6368026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2192013 |
|---|
| End bp | 2193134 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642677469 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001952292 |
|---|
| Protein GI | 189425115 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAG ATGAATGTGC TGGAAAGAAA CAGGAAGGTT TCTCGGTTGC CAGGATGCTT
GAAGAACGGG GAGTCTCGCG GCGTGATTTC CTGAAATTCT GTTCTACTGT CACCGCTGCC
ATGGCGTTAC CTGCCACCAT GGCACCCAAG GTGGCTCAAG CCCTGGACAA GGTGCAGCGT
CCTCCGCTGG TCTGGCTGGA GTTTCAGGAT TGCTGCGGCG ACACGGAGGC TCTGTTACGT
TCAGCCAACC CCACCGTGGG AGAGCTGGTA CTGGATATCC TCTCGGTTGA TTACCATGAA
ACCATCATGG CTGCTGCCGG TCATCAGGCT GAGGCCAACC TCGAAAAGAC CATCAAAGAG
TTCCAGGGCA AATACCTCTG CGTGGTTGAG GGTTCCATCC CGATGAAGGA AGGAGGAGCC
TATGGCTGTG TTGGCGGCAA GTCCCATCTG GCCCGGGCCA AACAGGTCTG TGGATCTGCA
GCAGCCACCA TTGCTGTGGG CACCTGTGCC AGTTTCGGCG GTATTCCCGC TGCTGCTCCC
AATCCCACCG GCGCAGTTGG GGTCAAAGAG GCGGTGCCCG GTGCTACGGT GATCAACCTG
CCCGGCTGCC CCTGCAATGC CGATAACCTG ACCGCTGTAG TGGTTCACTT CCTTACCTTT
GGTAAACTTC CCAGTCTTGA CAGCCATGGC CGTCCCCTGT TTGCCTACGG CAAGCGGATT
CATGACAACT GTGAACGTCG TCCCCACTTT GATGCCGGTC AGTATGTTGA GCATTGGGGG
GATGATGCCC ACCGCAAGGG GCACTGCCTC TACAAGATGG GCTGTAAGGG TCCGGCAACC
TTCCATAACT GTCCCACCCA GCGTTTTAAC GAGAGAATCA GCTGGCCGGT TGCTGCCGGT
CATGGCTGTG TCGGCTGTTC CGAACCCCAG TTCTGGGATA CTTCGCCACT CTATCGCCGT
CTGCCCAACG TGCCTGGCTT TGGTATTGAG CAGAGTGCCG ACAAGATCGG GCTTGCCTTT
ACTGCCGGTG TGGGTGGTGC CTTTGCTATC CATGGTGCCA TGAATGCCCT GCGCAAGGAT
AAAGATACGG CTGACGAGAA CACAAAAGAC GGGGAGGAAT AG
|
|---|
| Protein sequence | MDRDECAGKK QEGFSVARML EERGVSRRDF LKFCSTVTAA MALPATMAPK VAQALDKVQR
PPLVWLEFQD CCGDTEALLR SANPTVGELV LDILSVDYHE TIMAAAGHQA EANLEKTIKE
FQGKYLCVVE GSIPMKEGGA YGCVGGKSHL ARAKQVCGSA AATIAVGTCA SFGGIPAAAP
NPTGAVGVKE AVPGATVINL PGCPCNADNL TAVVVHFLTF GKLPSLDSHG RPLFAYGKRI
HDNCERRPHF DAGQYVEHWG DDAHRKGHCL YKMGCKGPAT FHNCPTQRFN ERISWPVAAG
HGCVGCSEPQ FWDTSPLYRR LPNVPGFGIE QSADKIGLAF TAGVGGAFAI HGAMNALRKD
KDTADENTKD GEE
|
|---|
| |