| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2054 |
|---|
| Symbol | |
|---|
| ID | 6367397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2189584 |
|---|
| End bp | 2190294 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642677467 |
|---|
| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| Protein accession | YP_001952290 |
|---|
| Protein GI | 189425113 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA AGAAGTTTAA ACAGTATATC TGGGAACTGC CGGTCCGCTG GTGCCACTGG
GTCAATGTGC TCTCGATTGT GGTGCTGGCG GGGACCGGTG TCCTGATCGG CAATCCGGTC
TTTATCGGCA GCTCTCCAGA GGCGTATCTG ATGGGCTGGA TCCGTTTCAT CCACTTTGTC
TTTGCCTATG CCTTTGCTGT CAGCGTCATC ACCCGGATGA TCTGGACCTT CCGGGGCAAC
TGTTATGCCG GCTGGCGGGA GTATTTTCCG TTTATGGGGG CAGCCGGCAG GGCAGAGATG
AAAGAGGTGT TTGACTATTA CACCTTCCGC AGCAAGCATC CACCTGAGAC CACAGGGCAC
AACCCCATGG CTGCCACCGC CTATTTTGTG CTGTTTCTGG TCTACTGGTT CATGATCCTG
ACCGGCTTTG CCATGTATGC CGAGCATGCG CCGGGCGGCA CCATGCACAG CCTGCTTAAA
CCGGTCTATG TCATGATGAC CACCCAGCAG ATGCATCTCT ACCACCATCT GGCCATGTAT
CTGATCTTCG GCTTTGTGAT CAACCATGTA TACAGTGCCT GGTTGATGGA TATTAAGGAA
AAAGGTGGAG AAATATCCAG TATGTTCAGT GGTTACAAGT TCACCACCAG CCCCTATGCG
GTCTGCAAGA GCAGATTCTG GGATTTCTTT CCCTGGAAGA GCAAAAAATA G
|
|---|
| Protein sequence | MSEKKFKQYI WELPVRWCHW VNVLSIVVLA GTGVLIGNPV FIGSSPEAYL MGWIRFIHFV
FAYAFAVSVI TRMIWTFRGN CYAGWREYFP FMGAAGRAEM KEVFDYYTFR SKHPPETTGH
NPMAATAYFV LFLVYWFMIL TGFAMYAEHA PGGTMHSLLK PVYVMMTTQQ MHLYHHLAMY
LIFGFVINHV YSAWLMDIKE KGGEISSMFS GYKFTTSPYA VCKSRFWDFF PWKSKK
|
|---|
| |